Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883976

Identifier: 218883976

GI number: 218883976

Start: 638415

End: 638807

Strand: Reverse

Name: 218883976

Synonym: DKAM_0665

Alternate gene names: NA

Gene position: 638807-638415 (Counterclockwise)

Preceding gene: 218883981

Following gene: 218883975

Centisome position: 46.79

GC content: 46.06

Gene sequence:

>393_bases
TTGAGGATAATACCTGTTAAAATAAATGAGGGCGATGTAGTCCATAGAAGTATCGAGGAATATATACGTAGAAACAGCTT
GAAGGGAGGCATTATAACAGGGATTGGAGGCCTCATGGAAGCTGTAATAGGATTCTACAGCCCTGAGTCCAAGACATACT
TGGAGAAAAGAATCAAGTCATCCGGGAGCGTCATCGAGGTGGCATCACTACAGGGAAACTACCTGGTTAAGCGGAACGGT
GAGGTAAGCATCCATATACATGTAGTAGCGGGATTTGAGAACACTACTGTTGCCGGCCACCTGATCCACGGCACCGCTAA
GCCGATGCTGGAAGTTTTCCTCATAGAGATCGGTGAGGTAGTTGAAGAAACATTCATCCATAGGGCTAGATGA

Upstream 100 bases:

>100_bases
GAGTAACTCTTCTTCATTCTCACTCCGCTGAAACCGGGTTTCATCACCATAACAAGGTTATATTAGTAGAACCTAATATA
TTGTACTGGTGTAATACATC

Downstream 100 bases:

>100_bases
GTACAGGAGGTCCTGCTACATACTAGTACTAGAGCTTCAAGAAGAGACAAGTATAGATTTAAGGCTCGGCAGGCAGAAAC
TAACACTAGGACCCGGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKSSGSVIEVASLQGNYLVKRNG
EVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEVVEETFIHRAR

Sequences:

>Translated_130_residues
MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKSSGSVIEVASLQGNYLVKRNG
EVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEVVEETFIHRAR
>Mature_130_residues
MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKSSGSVIEVASLQGNYLVKRNG
EVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEVVEETFIHRAR

Specific function: Unknown

COG id: COG1661

COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14368; Mature: 14368

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKS
CEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
SGSVIEVASLQGNYLVKRNGEVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEV
CCCEEEEEECCCCEEEEECCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
VEETFIHRAR
HHHHHHHCCC
>Mature Secondary Structure
MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKS
CEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
SGSVIEVASLQGNYLVKRNGEVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEV
CCCEEEEEECCCCEEEEECCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
VEETFIHRAR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA