Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883976
Identifier: 218883976
GI number: 218883976
Start: 638415
End: 638807
Strand: Reverse
Name: 218883976
Synonym: DKAM_0665
Alternate gene names: NA
Gene position: 638807-638415 (Counterclockwise)
Preceding gene: 218883981
Following gene: 218883975
Centisome position: 46.79
GC content: 46.06
Gene sequence:
>393_bases TTGAGGATAATACCTGTTAAAATAAATGAGGGCGATGTAGTCCATAGAAGTATCGAGGAATATATACGTAGAAACAGCTT GAAGGGAGGCATTATAACAGGGATTGGAGGCCTCATGGAAGCTGTAATAGGATTCTACAGCCCTGAGTCCAAGACATACT TGGAGAAAAGAATCAAGTCATCCGGGAGCGTCATCGAGGTGGCATCACTACAGGGAAACTACCTGGTTAAGCGGAACGGT GAGGTAAGCATCCATATACATGTAGTAGCGGGATTTGAGAACACTACTGTTGCCGGCCACCTGATCCACGGCACCGCTAA GCCGATGCTGGAAGTTTTCCTCATAGAGATCGGTGAGGTAGTTGAAGAAACATTCATCCATAGGGCTAGATGA
Upstream 100 bases:
>100_bases GAGTAACTCTTCTTCATTCTCACTCCGCTGAAACCGGGTTTCATCACCATAACAAGGTTATATTAGTAGAACCTAATATA TTGTACTGGTGTAATACATC
Downstream 100 bases:
>100_bases GTACAGGAGGTCCTGCTACATACTAGTACTAGAGCTTCAAGAAGAGACAAGTATAGATTTAAGGCTCGGCAGGCAGAAAC TAACACTAGGACCCGGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKSSGSVIEVASLQGNYLVKRNG EVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEVVEETFIHRAR
Sequences:
>Translated_130_residues MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKSSGSVIEVASLQGNYLVKRNG EVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEVVEETFIHRAR >Mature_130_residues MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKSSGSVIEVASLQGNYLVKRNG EVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEVVEETFIHRAR
Specific function: Unknown
COG id: COG1661
COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14368; Mature: 14368
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKS CEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC SGSVIEVASLQGNYLVKRNGEVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEV CCCEEEEEECCCCEEEEECCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH VEETFIHRAR HHHHHHHCCC >Mature Secondary Structure MRIIPVKINEGDVVHRSIEEYIRRNSLKGGIITGIGGLMEAVIGFYSPESKTYLEKRIKS CEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC SGSVIEVASLQGNYLVKRNGEVSIHIHVVAGFENTTVAGHLIHGTAKPMLEVFLIEIGEV CCCEEEEEECCCCEEEEECCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH VEETFIHRAR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA