Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883982
Identifier: 218883982
GI number: 218883982
Start: 643819
End: 644352
Strand: Reverse
Name: 218883982
Synonym: DKAM_0671
Alternate gene names: NA
Gene position: 644352-643819 (Counterclockwise)
Preceding gene: 218883989
Following gene: 218883981
Centisome position: 47.2
GC content: 44.01
Gene sequence:
>534_bases GTGGAGTATATGAGCTTCAACCTAATGATTACGCATGAGCCAGGCTTGGAAAACTTCAGGTTTGTATTGGCGAAGCTGAG GAACACAGGGTTAAACTATGTCTTGGTTGATAAGGGGCCCTCGGTAATATTGTTAAAGGTCGATGACCCCTACGACTTCA CATCGAGGATCAGGGAGGCAGTCAACGAGATCCAGGTGATTTATAGAGTAATACCTATAGATGTGGTAACGGATCCCTAT GTTGAAATAGTTGCTGAGAAATCAAGAGAGCTGGCACTGGAGAAGATACCCGTGGACAAGACATACAGGGTGACACTACA CGGCAGGCTCTACTGGCTTGAAACAAGGCTCCCAGCTCACACGATGGATGCTATAAGGGTGATAGCCGATAAGATAGATA GACAGGTGTCGCTAACCCACCCAGATTACCTTGTATACATTAGGAGCGTTAAATTATATCATAGGAGGAGATACGCTACA ATAACTGTTACATCGCCAAGCAATATTATAGCATTAAAATCAGATAAACCATAG
Upstream 100 bases:
>100_bases GTTAGAAATCCTAGCTATCAATGTTCTCACTTAACCTCGTTATTATTATTTTATAATATACCTTGAGATATTATATCCCT TATAAGCGTTGAATGAAACG
Downstream 100 bases:
>100_bases CTAGTATAAGGAAACCGCGGGCTCAATAATTATAAGTCATTCTCTGGATCATCATTTATGAGGGAGTAATTGTGCCGGTA AACCTCGGCGACATATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREAVNEIQVIYRVIPIDVVTDPY VEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAHTMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYAT ITVTSPSNIIALKSDKP
Sequences:
>Translated_177_residues MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREAVNEIQVIYRVIPIDVVTDPY VEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAHTMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYAT ITVTSPSNIIALKSDKP >Mature_177_residues MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREAVNEIQVIYRVIPIDVVTDPY VEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAHTMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYAT ITVTSPSNIIALKSDKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20603; Mature: 20603
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREA CCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHH VNEIQVIYRVIPIDVVTDPYVEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAH HHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHHHCCCCCCEEEEEEEEEEEEEEECCCCH TMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYATITVTSPSNIIALKSDKP HHHHHHHHHHHHCCEEEECCCCEEEEEEHHHHEECCEEEEEEEECCCCEEEEECCCC >Mature Secondary Structure MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREA CCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHH VNEIQVIYRVIPIDVVTDPYVEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAH HHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHHHCCCCCCEEEEEEEEEEEEEEECCCCH TMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYATITVTSPSNIIALKSDKP HHHHHHHHHHHHCCEEEECCCCEEEEEEHHHHEECCEEEEEEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA