Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883982

Identifier: 218883982

GI number: 218883982

Start: 643819

End: 644352

Strand: Reverse

Name: 218883982

Synonym: DKAM_0671

Alternate gene names: NA

Gene position: 644352-643819 (Counterclockwise)

Preceding gene: 218883989

Following gene: 218883981

Centisome position: 47.2

GC content: 44.01

Gene sequence:

>534_bases
GTGGAGTATATGAGCTTCAACCTAATGATTACGCATGAGCCAGGCTTGGAAAACTTCAGGTTTGTATTGGCGAAGCTGAG
GAACACAGGGTTAAACTATGTCTTGGTTGATAAGGGGCCCTCGGTAATATTGTTAAAGGTCGATGACCCCTACGACTTCA
CATCGAGGATCAGGGAGGCAGTCAACGAGATCCAGGTGATTTATAGAGTAATACCTATAGATGTGGTAACGGATCCCTAT
GTTGAAATAGTTGCTGAGAAATCAAGAGAGCTGGCACTGGAGAAGATACCCGTGGACAAGACATACAGGGTGACACTACA
CGGCAGGCTCTACTGGCTTGAAACAAGGCTCCCAGCTCACACGATGGATGCTATAAGGGTGATAGCCGATAAGATAGATA
GACAGGTGTCGCTAACCCACCCAGATTACCTTGTATACATTAGGAGCGTTAAATTATATCATAGGAGGAGATACGCTACA
ATAACTGTTACATCGCCAAGCAATATTATAGCATTAAAATCAGATAAACCATAG

Upstream 100 bases:

>100_bases
GTTAGAAATCCTAGCTATCAATGTTCTCACTTAACCTCGTTATTATTATTTTATAATATACCTTGAGATATTATATCCCT
TATAAGCGTTGAATGAAACG

Downstream 100 bases:

>100_bases
CTAGTATAAGGAAACCGCGGGCTCAATAATTATAAGTCATTCTCTGGATCATCATTTATGAGGGAGTAATTGTGCCGGTA
AACCTCGGCGACATATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREAVNEIQVIYRVIPIDVVTDPY
VEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAHTMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYAT
ITVTSPSNIIALKSDKP

Sequences:

>Translated_177_residues
MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREAVNEIQVIYRVIPIDVVTDPY
VEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAHTMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYAT
ITVTSPSNIIALKSDKP
>Mature_177_residues
MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREAVNEIQVIYRVIPIDVVTDPY
VEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAHTMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYAT
ITVTSPSNIIALKSDKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20603; Mature: 20603

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREA
CCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHH
VNEIQVIYRVIPIDVVTDPYVEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAH
HHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHHHCCCCCCEEEEEEEEEEEEEEECCCCH
TMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYATITVTSPSNIIALKSDKP
HHHHHHHHHHHHCCEEEECCCCEEEEEEHHHHEECCEEEEEEEECCCCEEEEECCCC
>Mature Secondary Structure
MEYMSFNLMITHEPGLENFRFVLAKLRNTGLNYVLVDKGPSVILLKVDDPYDFTSRIREA
CCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHHHH
VNEIQVIYRVIPIDVVTDPYVEIVAEKSRELALEKIPVDKTYRVTLHGRLYWLETRLPAH
HHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHHHCCCCCCEEEEEEEEEEEEEEECCCCH
TMDAIRVIADKIDRQVSLTHPDYLVYIRSVKLYHRRRYATITVTSPSNIIALKSDKP
HHHHHHHHHHHHCCEEEECCCCEEEEEEHHHHEECCEEEEEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA