| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883880
Identifier: 218883880
GI number: 218883880
Start: 533058
End: 533591
Strand: Reverse
Name: 218883880
Synonym: DKAM_0569
Alternate gene names: NA
Gene position: 533591-533058 (Counterclockwise)
Preceding gene: 218883883
Following gene: 218883879
Centisome position: 39.08
GC content: 47.94
Gene sequence:
>534_bases GTGGTGGTCTATAGGTTGAGGGAGAGCGTGCAGGATCTAATAGTTAAATGGTTGATGGAGGAGTCATTTACAACCAGGAA GCTTGAGGCACCTCCTGGAGCAGGTATTAAATGGGGAATCAATGTAACTACTCCAGGCAACCCTGGCGTGAACTTCACCG TCGTGAACCCCGTTGACAAGCCGGATAGGTATATACTCGCCCTCGCCATAGTTGTATCGCCTGAGCATGCACGGGAACTA GAGAAAATGAAGCCTGCTGAGAGGCTTAGAGTGATGAATAGCATTCTATCCAAGGCTCTAACCGTGTGCATAGACTGTAA GATAATGGTGCAGCCGAATATAGTTACCCCGCAGACAATAACTGTGAACATGGAGTTTTTCGAGGATGAGTTACGCAGCT ACGGTAAGTCATTCTTTCTAAGGCTTGTATGGAGATTCCTCAACACTTACCTGGCGATAGTCTCAGGGTTTAACGAATGG ATGCCTGTGCCGCCGCCCAGCACGGATAAGTTGTCGCCACAAACCTTTATATAG
Upstream 100 bases:
>100_bases TCTATCAAGGTGCTATACCACCATTGTTAACCTTAAAGTTATACTTAAAGCCGTACAGTATTAAATAAGCCCTTCAAGAA ATAAAGTATTGTTAAGGCCA
Downstream 100 bases:
>100_bases GAGTTAAATAATAGCGTATCAATGGTGACTCTTAGTGAGGCTTAGAGGACTCATTCCACTATTTCTCCTGGCACTAATGC TCTCAACGATCTATAGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDKPDRYILALAIVVSPEHAREL EKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTITVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEW MPVPPPSTDKLSPQTFI
Sequences:
>Translated_177_residues MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDKPDRYILALAIVVSPEHAREL EKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTITVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEW MPVPPPSTDKLSPQTFI >Mature_177_residues MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDKPDRYILALAIVVSPEHAREL EKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTITVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEW MPVPPPSTDKLSPQTFI
Specific function: Unknown
COG id: COG5440
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20186; Mature: 20186
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDK CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCC PDRYILALAIVVSPEHARELEKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTI CCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEE TVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEWMPVPPPSTDKLSPQTFI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVVYRLRESVQDLIVKWLMEESFTTRKLEAPPGAGIKWGINVTTPGNPGVNFTVVNPVDK CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCC PDRYILALAIVVSPEHARELEKMKPAERLRVMNSILSKALTVCIDCKIMVQPNIVTPQTI CCCEEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEE TVNMEFFEDELRSYGKSFFLRLVWRFLNTYLAIVSGFNEWMPVPPPSTDKLSPQTFI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA