Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883879

Identifier: 218883879

GI number: 218883879

Start: 532604

End: 533023

Strand: Reverse

Name: 218883879

Synonym: DKAM_0568

Alternate gene names: NA

Gene position: 533023-532604 (Counterclockwise)

Preceding gene: 218883880

Following gene: 218883878

Centisome position: 39.04

GC content: 43.33

Gene sequence:

>420_bases
GTGAGGCTTAGAGGACTCATTCCACTATTTCTCCTGGCACTAATGCTCTCAACGATCTATAGTGTAGCCGAGGAGAATGC
TAATATAACCGGGGTCGATATACTTAATGAGCTGCTGAGTAATCCAAGAGTATATATAGCAGTATTCATACAATTCATAC
TGGGACTAGCCATCGGGTATTTCTCATTAAAGGTCCTCAAGTACATTGTAGCATTAATACTCATCATAATACTTGGAGTA
ATACTCTCCGTATGGAGCATAGGCGGGAGCATATATGACTTACTCGCCAAAATATATGGCTCATCCTCGCAGATACTTAA
AATAGTTGAATCAATCGCCTCAACCCTCGGGTTGCTGACAATCGGACCCATCGCAGTGGGCTTTATAGTGGGAGTGATAA
TCGCCTGGGTCAAGGGCTAG

Upstream 100 bases:

>100_bases
TTTAACGAATGGATGCCTGTGCCGCCGCCCAGCACGGATAAGTTGTCGCCACAAACCTTTATATAGGAGTTAAATAATAG
CGTATCAATGGTGACTCTTA

Downstream 100 bases:

>100_bases
GCAAACCCATGAAGCAAAGCCCGCCTTGTAAACCCCTTGTAGGGCTGGTCAAGGGCGGGTTCCGCGGCGTGCCGGAGAGG
GCTGGCGTCTACGTGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGYFSLKVLKYIVALILIIILGV
ILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLTIGPIAVGFIVGVIIAWVKG

Sequences:

>Translated_139_residues
MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGYFSLKVLKYIVALILIIILGV
ILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLTIGPIAVGFIVGVIIAWVKG
>Mature_139_residues
MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGYFSLKVLKYIVALILIIILGV
ILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLTIGPIAVGFIVGVIIAWVKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14964; Mature: 14964

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FSLKVLKYIVALILIIILGVILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGPIAVGFIVGVIIAWVKG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLRGLIPLFLLALMLSTIYSVAEENANITGVDILNELLSNPRVYIAVFIQFILGLAIGY
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FSLKVLKYIVALILIIILGVILSVWSIGGSIYDLLAKIYGSSSQILKIVESIASTLGLLT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGPIAVGFIVGVIIAWVKG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA