| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883883
Identifier: 218883883
GI number: 218883883
Start: 535357
End: 536559
Strand: Reverse
Name: 218883883
Synonym: DKAM_0572
Alternate gene names: NA
Gene position: 536559-535357 (Counterclockwise)
Preceding gene: 218883887
Following gene: 218883880
Centisome position: 39.3
GC content: 42.23
Gene sequence:
>1203_bases ATGGATCTCCCTGTGGCGGCTTTAAACATAGGATTGGCTTCGATAATGGATTTGCTGATAAACCTGATTGCTGTTAAATA CTTTAATTTCAGTGTTGTGGAACTCGGATTACTGAACGCTTTGTGGACCATTGTTTTCATACCTGTAGTGAGGATCATGG ATAGATTAGCCGATGCTGGGAGGGTGAGGCTCTTATGGTATATAGGTAGCTCCTCGATGGCTCTGCTGCAGGCCTTGATG TATTTCTCCTTGATATTTCACTCGAAGCAGTTGATCTATGTAACCTACATGATTCACACACTAGTATTTGCCTCCACAAG GCTTGCCGTGAACACATATATTTTCGAGACCAGGGATAGTGGCTCATGGAGCAAAGCATCGATAATGATTTCACGGCTTA GACTACTATCCGAGTCGGTGATCATACTATCTCTAGCCCTAGTTGGGTTCTCCACGATTGTTACATCCGGATACATATAT CTAGCAGTATTATTCACACTCCTACACTTCTCAGGGTTGTTAGTGATATATGAACCCCGGTTGAAAATAGAGAGAGTGCT CTACAGGCTTGAATCAATGCTTGGAATGATCTTCATACCCGTCAAGGGGCTTCTCACGCTCTCTTACCTGGAGATAAATA GTTCTATACCGTTATCTACAAGAATATATGCATCAGCTCTTGTGCCCTCGGGTCTAATACTTCTTGCCCTAGTTGGCTTC AGGCTTAGTAACGAATACTTATGGACACCCCTCCCTTATTATTTAACACAGGTGTTGGAACTAGGCATTAATGATGTATT AATGGTTTATGGGCTGGGCAGGCTTATAGCTTTCAGCCTATACATCGCAGTCCGATCCAACCTAGTGTTTAAGAAGGGTT CCTTCGCAATAGGTATCCTAGTTAGGCTTCTTGTACTGATGATCTTGAATAATATAAGGAACAGTGTCCTGATAGGGTTC CTTCTCGGATTAATATACCTGGCAAACGATATAATAGATTCAAACCTGTTCCTAGCATTCGCTAAGAATCGTGGCGGATA TGGTGTTGGATTGTATAGTTTAATAGGTGAAATAATAAGTCTTGTAGGCTCAGCTTCTTCAGGCTACATATATGCTGTAG GGGGTTCATCATTAATCGCTGTTCTAACAACTGTGTTATCGATGCTTGTTATCCCGGTGGTCCTGAAATCTAGGAGTGAA TGA
Upstream 100 bases:
>100_bases CCACCAACCCATATAAACCACTCCTTTAAACACCAAAAAGACTTCGACCTATCTACTTTTAAGCTTCATGTATATTACAT GAAGTGATTGGTGCTGCTTC
Downstream 100 bases:
>100_bases TATGCTTTCCTCCGGGTAACCACGTTAAAAAATCCATATTGGTTTAGAGGCCTCACGCCCTCTTCCTTATAACTATCTTC TGCCCAATGATCATGCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MDLPVAALNIGLASIMDLLINLIAVKYFNFSVVELGLLNALWTIVFIPVVRIMDRLADAGRVRLLWYIGSSSMALLQALM YFSLIFHSKQLIYVTYMIHTLVFASTRLAVNTYIFETRDSGSWSKASIMISRLRLLSESVIILSLALVGFSTIVTSGYIY LAVLFTLLHFSGLLVIYEPRLKIERVLYRLESMLGMIFIPVKGLLTLSYLEINSSIPLSTRIYASALVPSGLILLALVGF RLSNEYLWTPLPYYLTQVLELGINDVLMVYGLGRLIAFSLYIAVRSNLVFKKGSFAIGILVRLLVLMILNNIRNSVLIGF LLGLIYLANDIIDSNLFLAFAKNRGGYGVGLYSLIGEIISLVGSASSGYIYAVGGSSLIAVLTTVLSMLVIPVVLKSRSE
Sequences:
>Translated_400_residues MDLPVAALNIGLASIMDLLINLIAVKYFNFSVVELGLLNALWTIVFIPVVRIMDRLADAGRVRLLWYIGSSSMALLQALM YFSLIFHSKQLIYVTYMIHTLVFASTRLAVNTYIFETRDSGSWSKASIMISRLRLLSESVIILSLALVGFSTIVTSGYIY LAVLFTLLHFSGLLVIYEPRLKIERVLYRLESMLGMIFIPVKGLLTLSYLEINSSIPLSTRIYASALVPSGLILLALVGF RLSNEYLWTPLPYYLTQVLELGINDVLMVYGLGRLIAFSLYIAVRSNLVFKKGSFAIGILVRLLVLMILNNIRNSVLIGF LLGLIYLANDIIDSNLFLAFAKNRGGYGVGLYSLIGEIISLVGSASSGYIYAVGGSSLIAVLTTVLSMLVIPVVLKSRSE >Mature_400_residues MDLPVAALNIGLASIMDLLINLIAVKYFNFSVVELGLLNALWTIVFIPVVRIMDRLADAGRVRLLWYIGSSSMALLQALM YFSLIFHSKQLIYVTYMIHTLVFASTRLAVNTYIFETRDSGSWSKASIMISRLRLLSESVIILSLALVGFSTIVTSGYIY LAVLFTLLHFSGLLVIYEPRLKIERVLYRLESMLGMIFIPVKGLLTLSYLEINSSIPLSTRIYASALVPSGLILLALVGF RLSNEYLWTPLPYYLTQVLELGINDVLMVYGLGRLIAFSLYIAVRSNLVFKKGSFAIGILVRLLVLMILNNIRNSVLIGF LLGLIYLANDIIDSNLFLAFAKNRGGYGVGLYSLIGEIISLVGSASSGYIYAVGGSSLIAVLTTVLSMLVIPVVLKSRSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44188; Mature: 44188
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPVAALNIGLASIMDLLINLIAVKYFNFSVVELGLLNALWTIVFIPVVRIMDRLADAG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVRLLWYIGSSSMALLQALMYFSLIFHSKQLIYVTYMIHTLVFASTRLAVNTYIFETRDS CEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC GSWSKASIMISRLRLLSESVIILSLALVGFSTIVTSGYIYLAVLFTLLHFSGLLVIYEPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC LKIERVLYRLESMLGMIFIPVKGLLTLSYLEINSSIPLSTRIYASALVPSGLILLALVGF HHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHH RLSNEYLWTPLPYYLTQVLELGINDVLMVYGLGRLIAFSLYIAVRSNLVFKKGSFAIGIL HHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH VRLLVLMILNNIRNSVLIGFLLGLIYLANDIIDSNLFLAFAKNRGGYGVGLYSLIGEIIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHH LVGSASSGYIYAVGGSSLIAVLTTVLSMLVIPVVLKSRSE HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLPVAALNIGLASIMDLLINLIAVKYFNFSVVELGLLNALWTIVFIPVVRIMDRLADAG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVRLLWYIGSSSMALLQALMYFSLIFHSKQLIYVTYMIHTLVFASTRLAVNTYIFETRDS CEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC GSWSKASIMISRLRLLSESVIILSLALVGFSTIVTSGYIYLAVLFTLLHFSGLLVIYEPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC LKIERVLYRLESMLGMIFIPVKGLLTLSYLEINSSIPLSTRIYASALVPSGLILLALVGF HHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHH RLSNEYLWTPLPYYLTQVLELGINDVLMVYGLGRLIAFSLYIAVRSNLVFKKGSFAIGIL HHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH VRLLVLMILNNIRNSVLIGFLLGLIYLANDIIDSNLFLAFAKNRGGYGVGLYSLIGEIIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHH LVGSASSGYIYAVGGSSLIAVLTTVLSMLVIPVVLKSRSE HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA