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The map label for this gene is 218883850

Identifier: 218883850

GI number: 218883850

Start: 505308

End: 506330

Strand: Reverse

Name: 218883850

Synonym: DKAM_0539

Alternate gene names: NA

Gene position: 506330-505308 (Counterclockwise)

Preceding gene: 218883851

Following gene: 218883849

Centisome position: 37.09

GC content: 46.14

Gene sequence:

>1023_bases
GTGGTCCCGGGTATGAAGGCATTAGTTAACTACTTCCTGCTAAGAGGAGACAACGAGGCCCTTGGACGAGGAGAGCTTAA
AGCATTACTCGAGGCATACGAGTGTAGAGATGTAGCTATGACATGCTACACAATGCTCTGTATAGTGAGACATAGATGCA
GGGATATAGCTGAGAGGATAGTGAGGAGGGCTGGCTACATAAAGGAGGGTGGGCTACTCTTAGCCGTTGACAACCCCTAT
GATCCATCAGTGATCCTGGAGAAACACTTGCTCGGTAATAGTGAGGTACACGCGTCAATATTGAAAAACAGCGTTAGCAA
CACTACCGCCGAGAAGTATACTTTATACCTTGGGGAGAGGCATGGCGTAAGAATAGTGAACACTGGGAGATCTAATCTCA
GGTTATTGTTTAGCGATGGATTAGTCTTCATAGGGTTGAAGACTGTTGAACAGGACTCTAAAGGCATGTACTATAGAAGT
GGAAGGCATAGGCCGTATAAGAGAAGCATAGCGTTAACACCTGATGTGTCAAGGCTGCTGGTGAACCTTACGAGGATCAG
GGAGGGGATGGTGTTACTCGACCCCTTCGCCGGCACGGGCAGCATATTACTGGAGGCTTGGTCCATGAATATCAGGGGAA
TCGGTGTTGAAGTAGACTGGAAGCTTGTTCATGGAATGGAGGAGAACCTTAGATTCTACAATACAAATGCCATACCTATT
CTAGGCGACTCCACACTCTTGGATTTAATCAGCGTCGATGCCATAGCAACCGATCCCCCCTATGGAAGAGGAGCTAGCAT
GCATGGCCACAGCTATCTGGAGTTATACAGCATGTTCATTGATAAAGCATGGAGTATACTAAGGAATAATAGCTACATGA
GTTTTATGACTCCAATAGAGCTTGAAGAAGTAGTGGGTGAGCTGCTATGCCGCAACGGTTTCACCGAGGTATCAAGGTAT
TATCAATACGTTCATGGAGGGCTTACAAGAGTAATCTACGTAGTGAGAAAGAATGAGCACTAA

Upstream 100 bases:

>100_bases
ACGCTTAGCACAAGGCTGGAGCACCCGTTAGTAGAGTATGTTGATATATCGTCGAGGATAGCCAGCGTGTTGAGAGAGTT
AATCCAGGCCTAGGGTAACC

Downstream 100 bases:

>100_bases
AGTATTCTTCCTAGGTACCGGGGCAGCGATACCGGTTACCAGGGGGCTCCCTTGTATCGCCCTAAGAGTGGATTCAAACA
TATACCTACTAGACGTAGGC

Product: putative RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MVPGMKALVNYFLLRGDNEALGRGELKALLEAYECRDVAMTCYTMLCIVRHRCRDIAERIVRRAGYIKEGGLLLAVDNPY
DPSVILEKHLLGNSEVHASILKNSVSNTTAEKYTLYLGERHGVRIVNTGRSNLRLLFSDGLVFIGLKTVEQDSKGMYYRS
GRHRPYKRSIALTPDVSRLLVNLTRIREGMVLLDPFAGTGSILLEAWSMNIRGIGVEVDWKLVHGMEENLRFYNTNAIPI
LGDSTLLDLISVDAIATDPPYGRGASMHGHSYLELYSMFIDKAWSILRNNSYMSFMTPIELEEVVGELLCRNGFTEVSRY
YQYVHGGLTRVIYVVRKNEH

Sequences:

>Translated_340_residues
MVPGMKALVNYFLLRGDNEALGRGELKALLEAYECRDVAMTCYTMLCIVRHRCRDIAERIVRRAGYIKEGGLLLAVDNPY
DPSVILEKHLLGNSEVHASILKNSVSNTTAEKYTLYLGERHGVRIVNTGRSNLRLLFSDGLVFIGLKTVEQDSKGMYYRS
GRHRPYKRSIALTPDVSRLLVNLTRIREGMVLLDPFAGTGSILLEAWSMNIRGIGVEVDWKLVHGMEENLRFYNTNAIPI
LGDSTLLDLISVDAIATDPPYGRGASMHGHSYLELYSMFIDKAWSILRNNSYMSFMTPIELEEVVGELLCRNGFTEVSRY
YQYVHGGLTRVIYVVRKNEH
>Mature_340_residues
MVPGMKALVNYFLLRGDNEALGRGELKALLEAYECRDVAMTCYTMLCIVRHRCRDIAERIVRRAGYIKEGGLLLAVDNPY
DPSVILEKHLLGNSEVHASILKNSVSNTTAEKYTLYLGERHGVRIVNTGRSNLRLLFSDGLVFIGLKTVEQDSKGMYYRS
GRHRPYKRSIALTPDVSRLLVNLTRIREGMVLLDPFAGTGSILLEAWSMNIRGIGVEVDWKLVHGMEENLRFYNTNAIPI
LGDSTLLDLISVDAIATDPPYGRGASMHGHSYLELYSMFIDKAWSILRNNSYMSFMTPIELEEVVGELLCRNGFTEVSRY
YQYVHGGLTRVIYVVRKNEH

Specific function: Unknown

COG id: COG1041

COG function: function code L; Predicted DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005885
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 38477; Mature: 38477

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPGMKALVNYFLLRGDNEALGRGELKALLEAYECRDVAMTCYTMLCIVRHRCRDIAERI
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRAGYIKEGGLLLAVDNPYDPSVILEKHLLGNSEVHASILKNSVSNTTAEKYTLYLGER
HHHCCCEECCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECC
HGVRIVNTGRSNLRLLFSDGLVFIGLKTVEQDSKGMYYRSGRHRPYKRSIALTPDVSRLL
CCEEEEECCCCCEEEEEECCEEEEEEEEECCCCCCCEEECCCCCCCCCCEEECCCHHHHH
VNLTRIREGMVLLDPFAGTGSILLEAWSMNIRGIGVEVDWKLVHGMEENLRFYNTNAIPI
HHHHHHHCCEEEEECCCCCCHHEEEEECCCEEEEEEEEEHHEECCHHHCCEEEECCEEEE
LGDSTLLDLISVDAIATDPPYGRGASMHGHSYLELYSMFIDKAWSILRNNSYMSFMTPIE
ECCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
LEEVVGELLCRNGFTEVSRYYQYVHGGLTRVIYVVRKNEH
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEEEEECCCC
>Mature Secondary Structure
MVPGMKALVNYFLLRGDNEALGRGELKALLEAYECRDVAMTCYTMLCIVRHRCRDIAERI
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRAGYIKEGGLLLAVDNPYDPSVILEKHLLGNSEVHASILKNSVSNTTAEKYTLYLGER
HHHCCCEECCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECC
HGVRIVNTGRSNLRLLFSDGLVFIGLKTVEQDSKGMYYRSGRHRPYKRSIALTPDVSRLL
CCEEEEECCCCCEEEEEECCEEEEEEEEECCCCCCCEEECCCCCCCCCCEEECCCHHHHH
VNLTRIREGMVLLDPFAGTGSILLEAWSMNIRGIGVEVDWKLVHGMEENLRFYNTNAIPI
HHHHHHHCCEEEEECCCCCCHHEEEEECCCEEEEEEEEEHHEECCHHHCCEEEECCEEEE
LGDSTLLDLISVDAIATDPPYGRGASMHGHSYLELYSMFIDKAWSILRNNSYMSFMTPIE
ECCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
LEEVVGELLCRNGFTEVSRYYQYVHGGLTRVIYVVRKNEH
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]