| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883532
Identifier: 218883532
GI number: 218883532
Start: 205551
End: 206021
Strand: Reverse
Name: 218883532
Synonym: DKAM_0221
Alternate gene names: NA
Gene position: 206021-205551 (Counterclockwise)
Preceding gene: 218883533
Following gene: 218883531
Centisome position: 15.09
GC content: 42.89
Gene sequence:
>471_bases ATGAGTAGGAGAAACTGGAGAGAAGACTTTATCAATGAAGTAGTAGAAGAGCTCGGGATACAGGATGAGCAGTTAAAAAA TAAATTAAGAGATAAGCTACGTGAAAAACTCGATGAATTACACTGCGGAGAGGAAAGCGATGCAGAGGAGATATCCAAGA TACTATCAGCCGTATCACCATTCTTAGAAAACCTATTCACCTGGCTTGGATCAGGGCTCAGGGACATATTCAACTTCATC CAGTCATCATATGATGGTAAAAAACTAGGAGAGGATATAGGGCAGTTATACCAGGCACTCAAGGCCCAGGGACTCCCCGA TGAAATGGTTAAAGAGATGGTTAAAGAATACTATTACTCAAGGCTTAAAGCGCTACCAGCATGGGGAGACCTCCTCGAAC GCCTCGCCCAGCTAATAATGCAGAGAACAGCTTCACAAAGGATAAGGGTTGATGAAGAAGAGAAACAATGA
Upstream 100 bases:
>100_bases AAATAGACATGCTAACATCGAGTGAGCAATAATTGATCACCCGTATCCAGGTAAAAATAATATTGTGAACACTCATTATT CCTAGAGTGAAGGTGGTAGA
Downstream 100 bases:
>100_bases AAGCCGGCCGTAGTACTTGATATACTAGAGGTAAAGCATGGCTTGAGCAGTATAGATGAGAAACTAGACATCCTCATCTC AGTATTGAGGGAGCTAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSRRNWREDFINEVVEELGIQDEQLKNKLRDKLREKLDELHCGEESDAEEISKILSAVSPFLENLFTWLGSGLRDIFNFI QSSYDGKKLGEDIGQLYQALKAQGLPDEMVKEMVKEYYYSRLKALPAWGDLLERLAQLIMQRTASQRIRVDEEEKQ
Sequences:
>Translated_156_residues MSRRNWREDFINEVVEELGIQDEQLKNKLRDKLREKLDELHCGEESDAEEISKILSAVSPFLENLFTWLGSGLRDIFNFI QSSYDGKKLGEDIGQLYQALKAQGLPDEMVKEMVKEYYYSRLKALPAWGDLLERLAQLIMQRTASQRIRVDEEEKQ >Mature_155_residues SRRNWREDFINEVVEELGIQDEQLKNKLRDKLREKLDELHCGEESDAEEISKILSAVSPFLENLFTWLGSGLRDIFNFIQ SSYDGKKLGEDIGQLYQALKAQGLPDEMVKEMVKEYYYSRLKALPAWGDLLERLAQLIMQRTASQRIRVDEEEKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18286; Mature: 18155
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRNWREDFINEVVEELGIQDEQLKNKLRDKLREKLDELHCGEESDAEEISKILSAVSP CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH FLENLFTWLGSGLRDIFNFIQSSYDGKKLGEDIGQLYQALKAQGLPDEMVKEMVKEYYYS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RLKALPAWGDLLERLAQLIMQRTASQRIRVDEEEKQ HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure SRRNWREDFINEVVEELGIQDEQLKNKLRDKLREKLDELHCGEESDAEEISKILSAVSP CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH FLENLFTWLGSGLRDIFNFIQSSYDGKKLGEDIGQLYQALKAQGLPDEMVKEMVKEYYYS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RLKALPAWGDLLERLAQLIMQRTASQRIRVDEEEKQ HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA