| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883531
Identifier: 218883531
GI number: 218883531
Start: 205068
End: 205508
Strand: Reverse
Name: 218883531
Synonym: DKAM_0220
Alternate gene names: NA
Gene position: 205508-205068 (Counterclockwise)
Preceding gene: 218883532
Following gene: 218883529
Centisome position: 15.05
GC content: 41.04
Gene sequence:
>441_bases TTGAGCAGTATAGATGAGAAACTAGACATCCTCATCTCAGTATTGAGGGAGCTAGTGGAGAAACTAGAGAAACTTGAGGA AAGACTGGAGAAACAAAACATCGATCACCCAGAAATTAAAATAGCGCTTGAAGTAGCATCAGCATTCTCACTCCCGTTAA TTAGGTCCCTTGAAATCGCTAGGATGGCTTATGATGTTTTAATTAGACTAGATAAACCGGATCCGATTACAAGGGCGATT ATTGAAGTACTTTCCAGCTGTAATGAAATGAGTATCTCGGAAATATATAGAGGTGTCAGAAACATACGTGGGAAAGCCTC AAGGCGCATCATTGGTGAGAGAGTTAGGATATTACTTAGTAAAGGCATTATAGTAAACATGGGGAGTAGTGAGAGGCCCA GAATAATATTGAGGAAGTGCCTGGAGAAGCCCCATGGATAG
Upstream 100 bases:
>100_bases AATAATGCAGAGAACAGCTTCACAAAGGATAAGGGTTGATGAAGAAGAGAAACAATGAAAGCCGGCCGTAGTACTTGATA TACTAGAGGTAAAGCATGGC
Downstream 100 bases:
>100_bases TAGAAAACACTATGTAATACTGTTTCTTGAATTACTGGACATCATTATAGGTGCTGCATCATGGGGGATAATCTTATTAT TGATTTTTCTTACAGGGTAC
Product: putative transcription regulator, ArsR family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSSIDEKLDILISVLRELVEKLEKLEERLEKQNIDHPEIKIALEVASAFSLPLIRSLEIARMAYDVLIRLDKPDPITRAI IEVLSSCNEMSISEIYRGVRNIRGKASRRIIGERVRILLSKGIIVNMGSSERPRIILRKCLEKPHG
Sequences:
>Translated_146_residues MSSIDEKLDILISVLRELVEKLEKLEERLEKQNIDHPEIKIALEVASAFSLPLIRSLEIARMAYDVLIRLDKPDPITRAI IEVLSSCNEMSISEIYRGVRNIRGKASRRIIGERVRILLSKGIIVNMGSSERPRIILRKCLEKPHG >Mature_145_residues SSIDEKLDILISVLRELVEKLEKLEERLEKQNIDHPEIKIALEVASAFSLPLIRSLEIARMAYDVLIRLDKPDPITRAII EVLSSCNEMSISEIYRGVRNIRGKASRRIIGERVRILLSKGIIVNMGSSERPRIILRKCLEKPHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16681; Mature: 16550
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIDEKLDILISVLRELVEKLEKLEERLEKQNIDHPEIKIALEVASAFSLPLIRSLEIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMAYDVLIRLDKPDPITRAIIEVLSSCNEMSISEIYRGVRNIRGKASRRIIGERVRILLS HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGIIVNMGSSERPRIILRKCLEKPHG CCEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SSIDEKLDILISVLRELVEKLEKLEERLEKQNIDHPEIKIALEVASAFSLPLIRSLEIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMAYDVLIRLDKPDPITRAIIEVLSSCNEMSISEIYRGVRNIRGKASRRIIGERVRILLS HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGIIVNMGSSERPRIILRKCLEKPHG CCEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA