| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is yfeT [C]
Identifier: 218883533
GI number: 218883533
Start: 206097
End: 206702
Strand: Reverse
Name: yfeT [C]
Synonym: DKAM_0222
Alternate gene names: 218883533
Gene position: 206702-206097 (Counterclockwise)
Preceding gene: 218883536
Following gene: 218883532
Centisome position: 15.14
GC content: 45.21
Gene sequence:
>606_bases ATGGTTTCAGGTGTAACAAGAGATGCTATGCTTGGGATAATAGACTTTGCATTGAAAGCAGTCGACTTGATAAGCGATGA TGAGAAGGAGAAAATGATATATACACTTATAGACGCGTTAAGAAATAATAAGAAGGTATTCGTCATAGGTGCTGGTAGAA GTGGTCTGGTTGGAAAGGCATTCGCTATGAGGCTTCTCCACCTAGGCTTCAACACGTATATTGTCGGTGAAACCATACTC CCAAGAGCCTCCCCGGGCGATGTCTTAGTATCCATCTCGGGTTCTGGTAGGACTAGACTGGTTGTTGCAGCTGCTGAGGT GGCTAAGAGTGTGGGAGTTAAGGTGATAGCTATAACCACATATCCTGATAGCCCGTTAGGTAAGCTAGCTGATATAGTCG TTAGAATACCTGGTAGAACCAAGATGGCTGCCGAGGAGGATTACATTAGCAGGCAGATATTGGGACTACATGAGCCCCTA GCCCCTCTTGGAACCCTCTTCGAGGATACACTGTTAATATTCCTTGACGGCGTTATTGCTGAGCTAATGGATAAACTCGG CGTCACCGAGGAAGAATTAAGAAATAGACATGCTAACATCGAGTGA
Upstream 100 bases:
>100_bases GTTTCCCGCGTCTATTCGGGTTTACACCTGTAAAACGCTTGATCTACGCATACTATATTATTTAAATACGTGTTAAAAGA TAGTAGCCTAAGGGAGTCTC
Downstream 100 bases:
>100_bases GCAATAATTGATCACCCGTATCCAGGTAAAAATAATATTGTGAACACTCATTATTCCTAGAGTGAAGGTGGTAGAATGAG TAGGAGAAACTGGAGAGAAG
Product: putative 6-phospho-3-hexuloisomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVSGVTRDAMLGIIDFALKAVDLISDDEKEKMIYTLIDALRNNKKVFVIGAGRSGLVGKAFAMRLLHLGFNTYIVGETIL PRASPGDVLVSISGSGRTRLVVAAAEVAKSVGVKVIAITTYPDSPLGKLADIVVRIPGRTKMAAEEDYISRQILGLHEPL APLGTLFEDTLLIFLDGVIAELMDKLGVTEEELRNRHANIE
Sequences:
>Translated_201_residues MVSGVTRDAMLGIIDFALKAVDLISDDEKEKMIYTLIDALRNNKKVFVIGAGRSGLVGKAFAMRLLHLGFNTYIVGETIL PRASPGDVLVSISGSGRTRLVVAAAEVAKSVGVKVIAITTYPDSPLGKLADIVVRIPGRTKMAAEEDYISRQILGLHEPL APLGTLFEDTLLIFLDGVIAELMDKLGVTEEELRNRHANIE >Mature_201_residues MVSGVTRDAMLGIIDFALKAVDLISDDEKEKMIYTLIDALRNNKKVFVIGAGRSGLVGKAFAMRLLHLGFNTYIVGETIL PRASPGDVLVSISGSGRTRLVVAAAEVAKSVGVKVIAITTYPDSPLGKLADIVVRIPGRTKMAAEEDYISRQILGLHEPL APLGTLFEDTLLIFLDGVIAELMDKLGVTEEELRNRHANIE
Specific function: Unknown
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017552 - InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 21700; Mature: 21700
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGVTRDAMLGIIDFALKAVDLISDDEKEKMIYTLIDALRNNKKVFVIGAGRSGLVGKA CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH FAMRLLHLGFNTYIVGETILPRASPGDVLVSISGSGRTRLVVAAAEVAKSVGVKVIAITT HHHHHHHHCCCEEEECCEECCCCCCCCEEEEECCCCCEEEEEEHHHHHHHCCEEEEEEEE YPDSPLGKLADIVVRIPGRTKMAAEEDYISRQILGLHEPLAPLGTLFEDTLLIFLDGVIA CCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ELMDKLGVTEEELRNRHANIE HHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure MVSGVTRDAMLGIIDFALKAVDLISDDEKEKMIYTLIDALRNNKKVFVIGAGRSGLVGKA CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH FAMRLLHLGFNTYIVGETILPRASPGDVLVSISGSGRTRLVVAAAEVAKSVGVKVIAITT HHHHHHHHCCCEEEECCEECCCCCCCCEEEEECCCCCEEEEEEHHHHHHHCCEEEEEEEE YPDSPLGKLADIVVRIPGRTKMAAEEDYISRQILGLHEPLAPLGTLFEDTLLIFLDGVIA CCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ELMDKLGVTEEELRNRHANIE HHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10382966 [H]