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The map label for this gene is fabF [H]

Identifier: 218532883

GI number: 218532883

Start: 5353556

End: 5354716

Strand: Reverse

Name: fabF [H]

Synonym: Mchl_5006

Alternate gene names: 218532883

Gene position: 5354716-5353556 (Counterclockwise)

Preceding gene: 218532884

Following gene: 218532882

Centisome position: 92.68

GC content: 72.78

Gene sequence:

>1161_bases
GTGAGTCGTCCGCAGGCCCGCGACGTCCAGGCTCGCGACGTCGTCGTCACCGGGATCGGCCTCGTCTCCTGCGCGGGCGA
GGGGATCGAGACGCACCTGAACGCCTTCGCCTCGAACGCGCCGCCGCGCACGGATGCGGAGACGTTCGCGCCCTATCCGG
TGCATCCGGTGGCACCGGTGAGCCTCGACGCGCAGATCCCGAAGAAGTCGGATCAGCGGCAGATGGAGGCGTGGCAGCGG
CTCGGCGTCTACGCCGCCGGCCTCGCGCTCGATTCGGCCGGGGTGAAGGAGGATGCGGGCTTCAAGTCGGCGCTGCCGCT
CGTGGTGGCGGCGGGCGGCGGCGAACGCGACTACGCGGTCGACGGCGCGATCCTCACCGGCCTGCGCGGCACCAACGATC
CCGGTGCCTTCCTCAACGAGCGGCTCCTCAACGATCTGCGGCCGACCCTGTTCCTGGCCCAGCTCTCGAACCTGCTCGCG
GGCAATATCAGCATCGTCCACGGCGTCACCGGCGCCTCGCGCACCTTCATGGGCGAGGAGTCGAGCGGCGTCGATGCCCT
GCGCATCGGCCACGCCCGCATCGCCTCGGGTCAGGTCGAGACCATGATGGTGGGCGGCTCCTACAACGCCGAGCGGCCGG
ACGTGATGGTCGTCCACGAGATGGGCGGCTACCTTCTCAAGACCGCCTACCGGCCGGTCTTCGAGCGGGGAGCCGAGGGC
ACGGGCGGCTTCGTGCTCGGCAGCGCCGCCGCCTTCCTCGTGCTGGAAGCGGCCGAGCACGCCGCCGCCCGCGGCGCAAA
AGCCCTGGCCCGGCTGATGCCGGTGGCCAACGATCGGGTCGCCCGCGCGCCGGGCAGCGTGTCCGCGAGCCTGACCCGCC
TCATCGGCGAGGCCGGGATCGAGCGGCCGGACGTGGTGCTCTCGGGCGCCACCGGCCTGGCCGACCTCGCGGCGGAAGAG
ATCGCTGGCCTCCACGCGGCGTTGCCGGGCGCGCGCATCCGCGCCACGGGCGATATGATCGGCCATCCGATGGAGGTCGC
GGCCCCGTTCGGGGCGGCTCTGGCCGCCGCACTCTGCGCCGCAGGATCGGCCGCGGAGGTCGCGGTCACCTCGGTCGGCC
ACCGCCGCGGTGAGGGCGTGATCCGCGTCGTGAGGATCTAG

Upstream 100 bases:

>100_bases
ACGCGGAGCTGCGGTTCCGCACCATGCCGTTTCCGGCCGGCCTCGACGCGCCGATGCGCGAACGCGCCCGGAAGATCGGC
CTTTTGGATGGAGCCCAGCC

Downstream 100 bases:

>100_bases
CGCATTATCCCGAAAGGCGACCGCCGGCTTTCGGGACGATGGCGATGCGAGAACGAGTGCCCGCCGCTTCGGAGACCGCC
GTCGCGGCGGTCCGGATGCG

Product: 3-oxoacyl-(acyl carrier protein) synthase II

Products: NA

Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSRPQARDVQARDVVVTGIGLVSCAGEGIETHLNAFASNAPPRTDAETFAPYPVHPVAPVSLDAQIPKKSDQRQMEAWQR
LGVYAAGLALDSAGVKEDAGFKSALPLVVAAGGGERDYAVDGAILTGLRGTNDPGAFLNERLLNDLRPTLFLAQLSNLLA
GNISIVHGVTGASRTFMGEESSGVDALRIGHARIASGQVETMMVGGSYNAERPDVMVVHEMGGYLLKTAYRPVFERGAEG
TGGFVLGSAAAFLVLEAAEHAAARGAKALARLMPVANDRVARAPGSVSASLTRLIGEAGIERPDVVLSGATGLADLAAEE
IAGLHAALPGARIRATGDMIGHPMEVAAPFGAALAAALCAAGSAAEVAVTSVGHRRGEGVIRVVRI

Sequences:

>Translated_386_residues
MSRPQARDVQARDVVVTGIGLVSCAGEGIETHLNAFASNAPPRTDAETFAPYPVHPVAPVSLDAQIPKKSDQRQMEAWQR
LGVYAAGLALDSAGVKEDAGFKSALPLVVAAGGGERDYAVDGAILTGLRGTNDPGAFLNERLLNDLRPTLFLAQLSNLLA
GNISIVHGVTGASRTFMGEESSGVDALRIGHARIASGQVETMMVGGSYNAERPDVMVVHEMGGYLLKTAYRPVFERGAEG
TGGFVLGSAAAFLVLEAAEHAAARGAKALARLMPVANDRVARAPGSVSASLTRLIGEAGIERPDVVLSGATGLADLAAEE
IAGLHAALPGARIRATGDMIGHPMEVAAPFGAALAAALCAAGSAAEVAVTSVGHRRGEGVIRVVRI
>Mature_385_residues
SRPQARDVQARDVVVTGIGLVSCAGEGIETHLNAFASNAPPRTDAETFAPYPVHPVAPVSLDAQIPKKSDQRQMEAWQRL
GVYAAGLALDSAGVKEDAGFKSALPLVVAAGGGERDYAVDGAILTGLRGTNDPGAFLNERLLNDLRPTLFLAQLSNLLAG
NISIVHGVTGASRTFMGEESSGVDALRIGHARIASGQVETMMVGGSYNAERPDVMVVHEMGGYLLKTAYRPVFERGAEGT
GGFVLGSAAAFLVLEAAEHAAARGAKALARLMPVANDRVARAPGSVSASLTRLIGEAGIERPDVVLSGATGLADLAAEEI
AGLHAALPGARIRATGDMIGHPMEVAAPFGAALAAALCAAGSAAEVAVTSVGHRRGEGVIRVVRI

Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthes

COG id: COG0304

COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]

Homologues:

Organism=Escherichia coli, GI1787337, Length=283, Percent_Identity=28.2685512367491, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017568
- InterPro:   IPR000794
- InterPro:   IPR018201
- InterPro:   IPR014031
- InterPro:   IPR014030
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]

EC number: =2.3.1.179 [H]

Molecular weight: Translated: 39618; Mature: 39486

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPQARDVQARDVVVTGIGLVSCAGEGIETHLNAFASNAPPRTDAETFAPYPVHPVAPV
CCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SLDAQIPKKSDQRQMEAWQRLGVYAAGLALDSAGVKEDAGFKSALPLVVAAGGGERDYAV
CCCCCCCCCCHHHHHHHHHHHCHHHHHEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEE
DGAILTGLRGTNDPGAFLNERLLNDLRPTLFLAQLSNLLAGNISIVHGVTGASRTFMGEE
CCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCC
SSGVDALRIGHARIASGQVETMMVGGSYNAERPDVMVVHEMGGYLLKTAYRPVFERGAEG
CCCCCEEEECCHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
TGGFVLGSAAAFLVLEAAEHAAARGAKALARLMPVANDRVARAPGSVSASLTRLIGEAGI
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHCC
ERPDVVLSGATGLADLAAEEIAGLHAALPGARIRATGDMIGHPMEVAAPFGAALAAALCA
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHH
AGSAAEVAVTSVGHRRGEGVIRVVRI
CCCCHHHHHHHHCCCCCCCEEEEEEC
>Mature Secondary Structure 
SRPQARDVQARDVVVTGIGLVSCAGEGIETHLNAFASNAPPRTDAETFAPYPVHPVAPV
CCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SLDAQIPKKSDQRQMEAWQRLGVYAAGLALDSAGVKEDAGFKSALPLVVAAGGGERDYAV
CCCCCCCCCCHHHHHHHHHHHCHHHHHEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEE
DGAILTGLRGTNDPGAFLNERLLNDLRPTLFLAQLSNLLAGNISIVHGVTGASRTFMGEE
CCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCC
SSGVDALRIGHARIASGQVETMMVGGSYNAERPDVMVVHEMGGYLLKTAYRPVFERGAEG
CCCCCEEEECCHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCC
TGGFVLGSAAAFLVLEAAEHAAARGAKALARLMPVANDRVARAPGSVSASLTRLIGEAGI
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHCC
ERPDVVLSGATGLADLAAEEIAGLHAALPGARIRATGDMIGHPMEVAAPFGAALAAALCA
CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHH
AGSAAEVAVTSVGHRRGEGVIRVVRI
CCCCHHHHHHHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550484 [H]