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The map label for this gene is 218710399

Identifier: 218710399

GI number: 218710399

Start: 2606984

End: 2607949

Strand: Reverse

Name: 218710399

Synonym: VS_2436

Alternate gene names: NA

Gene position: 2607949-2606984 (Counterclockwise)

Preceding gene: 218710400

Following gene: 218710398

Centisome position: 79.05

GC content: 42.13

Gene sequence:

>966_bases
ATGGATAATGTAAGTGTTTCACTCGGCCTATTATTCATCGCGGTGCTTTTTATCTCCCAAGCTTTGTTACTGCCTGCTGC
GGGGAAAAAAGCTAAGCATAAAGAGCTTTCTCGACGTTTGAAAGAGACCCAACGTAATATCGATGAAGAGAGCTTATCGC
TACTCAAAGAGCATTATAATAAAGACTTATCCCCATTAGATCGCAAGCTCATCGTTATCCCTTATTTTGCTGGCTTAAAA
CGGATGTTGGAGTTAGCCGGTATTAGAGTTTCGCTAAGTCGCTTTTTACTCATTGTTGCTCTATGCGGTGTGTCGCTCAC
TCTGATATCAATAATGACTCAACAAGAGTGGTTCATTAGCCTAACGGCATTCATTGCTGTCTGGGTTGTTGCTTACCTGT
ATGTGCAAAATCGAGTGAGTTATCGAATGGCTCGATTTGAAGAGCAGCTCCCTGAAGCGTTGGATATTATCCGACGGGCA
TTACAAGCTGGGCAGCCGCTAATTCAATCATTCAATGAGGTTGGTGAAGAACTCCCAGACCCTATCGGTGCCGAGTTTAA
AAATACCTATAACCTACTTAACTATGGTTACGATTTACGTTTGGCTATCTTACAAATGGCTGAGCGTGTCCCCACCGTAT
CAATGTTAGCTTTTTCTAGTGCGGTAATGTTGCAGAAAGAAACAGGGGGTAACCTCTCCGAAAATCTTCAAAAAGTATCC
GAAGTTCTCAGATCTCGCTTTAAGCTAGAAAGGAAAATAAAAACGCTTTCTGCTGAAAGTCGGCTATCAGCATGGATATT
AACCTTATCCCCATTTGGTTTGTTTTTTGCTTTGAAAGTGGCGAATCCAGATTATATTGAGCCGCTTTATAATGACCCTC
GCGGCGTTTCAATGGTCAGTGTTGGTATCGTACTTTTAGCGATTGGAGCCCTATGGATTAAGCGAATCATCAGCATAGAG
ATTTAA

Upstream 100 bases:

>100_bases
TGCGACGGGGATCGTACCTCAATATCATGACCAGTTAGTTAAACGTGGACTCGATCTGCCTTTCGAGCTCTTCACTGAGA
CTCATGGTTAAGGAGAGATT

Downstream 100 bases:

>100_bases
CCTATGGAATTATTAAACATTGAAGTTTGGAAGCAAATGTTAGCGGACTTTGGAGTCAGCTCTCAGATGGTTATCTACGT
AATGATTTTGCTTACCACCA

Product: Flp pilus assembly protein TadB

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System Protein F; Type II Secretion System F Domain; Type II Secretion System; Type II Secretion System Protein F Domain; Tight Adherence Protein B; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; MaoC Protein; Flp Type Pilus Assembly Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Bacterial Type II Secretion System Protein F; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MDNVSVSLGLLFIAVLFISQALLLPAAGKKAKHKELSRRLKETQRNIDEESLSLLKEHYNKDLSPLDRKLIVIPYFAGLK
RMLELAGIRVSLSRFLLIVALCGVSLTLISIMTQQEWFISLTAFIAVWVVAYLYVQNRVSYRMARFEEQLPEALDIIRRA
LQAGQPLIQSFNEVGEELPDPIGAEFKNTYNLLNYGYDLRLAILQMAERVPTVSMLAFSSAVMLQKETGGNLSENLQKVS
EVLRSRFKLERKIKTLSAESRLSAWILTLSPFGLFFALKVANPDYIEPLYNDPRGVSMVSVGIVLLAIGALWIKRIISIE
I

Sequences:

>Translated_321_residues
MDNVSVSLGLLFIAVLFISQALLLPAAGKKAKHKELSRRLKETQRNIDEESLSLLKEHYNKDLSPLDRKLIVIPYFAGLK
RMLELAGIRVSLSRFLLIVALCGVSLTLISIMTQQEWFISLTAFIAVWVVAYLYVQNRVSYRMARFEEQLPEALDIIRRA
LQAGQPLIQSFNEVGEELPDPIGAEFKNTYNLLNYGYDLRLAILQMAERVPTVSMLAFSSAVMLQKETGGNLSENLQKVS
EVLRSRFKLERKIKTLSAESRLSAWILTLSPFGLFFALKVANPDYIEPLYNDPRGVSMVSVGIVLLAIGALWIKRIISIE
I
>Mature_321_residues
MDNVSVSLGLLFIAVLFISQALLLPAAGKKAKHKELSRRLKETQRNIDEESLSLLKEHYNKDLSPLDRKLIVIPYFAGLK
RMLELAGIRVSLSRFLLIVALCGVSLTLISIMTQQEWFISLTAFIAVWVVAYLYVQNRVSYRMARFEEQLPEALDIIRRA
LQAGQPLIQSFNEVGEELPDPIGAEFKNTYNLLNYGYDLRLAILQMAERVPTVSMLAFSSAVMLQKETGGNLSENLQKVS
EVLRSRFKLERKIKTLSAESRLSAWILTLSPFGLFFALKVANPDYIEPLYNDPRGVSMVSVGIVLLAIGALWIKRIISIE
I

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36205; Mature: 36205

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA