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The map label for this gene is 218710397

Identifier: 218710397

GI number: 218710397

Start: 2605008

End: 2606012

Strand: Reverse

Name: 218710397

Synonym: VS_2434

Alternate gene names: NA

Gene position: 2606012-2605008 (Counterclockwise)

Preceding gene: 218710398

Following gene: 218710396

Centisome position: 78.99

GC content: 39.3

Gene sequence:

>1005_bases
ATGATACGAGTGAGTAGATATTTTCTAGCTTTATTAGTGTTCGTTATTCTTGGTTGTGCATCCTCGGATGAGCCGACAAA
CCAGTTTGATGCAGAGTTGTATTCAGGTAAACCAATCGATACCTTAAGCAGTGATGACCCTCCACTGAGTGAGAAAGAAG
CCATTATGCGTGGTGATGTAGCATTGAGGGATAACAATATTGATTTGGCCCTTTATGAATATATTCGCTCTCTATCCTTT
CCTGAGAAAGAGTTTCACGATAAAACGCTTTTTACGATAGGCCAAATTCATTCATCTCGTGGTAACTATGCACTATCCGA
GAAAGCTTATTTAGCAGCATTAGATTTTAACCCTGCACATACCGAAGTCCTAGAGCAATTAGGTGTTTTGTATACAAAGC
AGCGTCGCAAAGAGGAAGGGCGGAGTTATTTCTTTAAAGCGATTAATGCAGATCAAGTGCGTTTAAAAAGTAGTGAAACG
ATTACAAATTACCAAGCCTTAAGTCAAAGTGAAGTGGCTGGTTTGAAGGTTGATAGCATGTCTCCCGAATTAGCTTTCAT
GGGGATAGGTGTGCTGGAAGATGTCGATGGAAAACACCAGATAGCGCAAGAGTACTTTAAAAAATCACTGACAATAGACA
AAAGTTCAGTTAAAGCTTTGTTGAATATGGGGTACTCCCACTACATGTATGGCAATTACAAGGAAGCGTATCAATACACT
CGTTCGGCTTTAGAGATAGAACCTAATAATGAAAAGGCTCAAAACAACCTTGCGCTTATTTACTTGGCTGCCGGGGATAT
CAAAAAGGCAACCAACGTTTTTATGAGACACATGGAAGCTCCTGAAGCTTTGAATAATGTCGGTTATTTTTTAATTTTGC
AGGGTAAGCCTGACGAAGCTATTCCCTATCTACAACAAGCTATCGATAAAAAAGCATCTTATTATAAAGTAGCGAATGAC
AACTTAAATAGAGCGTTATCTGAGGTAAGAGAGATGGAGCAGTAA

Upstream 100 bases:

>100_bases
TCCCTATGCTGTTGTTTATTTGGCCTTGCTTTTTTATTGTCGCGTTAGGGCCTGGGATCATTATTGTTATTGATGCACTT
GGTGCACCAGGAGTAAGTTT

Downstream 100 bases:

>100_bases
CGACTTAAATTATTATCTTTGGGTTAATGAAAAGGATATTCATCTTGCCTAAGAGTGAAAGTTTTAATAAAGATATCATC
ATTATTTCTGTTGTTTGGTT

Product: TPR-repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Repeat Protein; TPR-Repeat-Containing Protein; Flp Pilus Assembly Protein TadD; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIRVSRYFLALLVFVILGCASSDEPTNQFDAELYSGKPIDTLSSDDPPLSEKEAIMRGDVALRDNNIDLALYEYIRSLSF
PEKEFHDKTLFTIGQIHSSRGNYALSEKAYLAALDFNPAHTEVLEQLGVLYTKQRRKEEGRSYFFKAINADQVRLKSSET
ITNYQALSQSEVAGLKVDSMSPELAFMGIGVLEDVDGKHQIAQEYFKKSLTIDKSSVKALLNMGYSHYMYGNYKEAYQYT
RSALEIEPNNEKAQNNLALIYLAAGDIKKATNVFMRHMEAPEALNNVGYFLILQGKPDEAIPYLQQAIDKKASYYKVAND
NLNRALSEVREMEQ

Sequences:

>Translated_334_residues
MIRVSRYFLALLVFVILGCASSDEPTNQFDAELYSGKPIDTLSSDDPPLSEKEAIMRGDVALRDNNIDLALYEYIRSLSF
PEKEFHDKTLFTIGQIHSSRGNYALSEKAYLAALDFNPAHTEVLEQLGVLYTKQRRKEEGRSYFFKAINADQVRLKSSET
ITNYQALSQSEVAGLKVDSMSPELAFMGIGVLEDVDGKHQIAQEYFKKSLTIDKSSVKALLNMGYSHYMYGNYKEAYQYT
RSALEIEPNNEKAQNNLALIYLAAGDIKKATNVFMRHMEAPEALNNVGYFLILQGKPDEAIPYLQQAIDKKASYYKVAND
NLNRALSEVREMEQ
>Mature_334_residues
MIRVSRYFLALLVFVILGCASSDEPTNQFDAELYSGKPIDTLSSDDPPLSEKEAIMRGDVALRDNNIDLALYEYIRSLSF
PEKEFHDKTLFTIGQIHSSRGNYALSEKAYLAALDFNPAHTEVLEQLGVLYTKQRRKEEGRSYFFKAINADQVRLKSSET
ITNYQALSQSEVAGLKVDSMSPELAFMGIGVLEDVDGKHQIAQEYFKKSLTIDKSSVKALLNMGYSHYMYGNYKEAYQYT
RSALEIEPNNEKAQNNLALIYLAAGDIKKATNVFMRHMEAPEALNNVGYFLILQGKPDEAIPYLQQAIDKKASYYKVAND
NLNRALSEVREMEQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37804; Mature: 37804

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVSRYFLALLVFVILGCASSDEPTNQFDAELYSGKPIDTLSSDDPPLSEKEAIMRGDV
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCE
ALRDNNIDLALYEYIRSLSFPEKEFHDKTLFTIGQIHSSRGNYALSEKAYLAALDFNPAH
EEECCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCEEECCCEEEEEEECCHHH
TEVLEQLGVLYTKQRRKEEGRSYFFKAINADQVRLKSSETITNYQALSQSEVAGLKVDSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCHHHHCCEEECCC
SPELAFMGIGVLEDVDGKHQIAQEYFKKSLTIDKSSVKALLNMGYSHYMYGNYKEAYQYT
CCCCCEEECCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHEECCCHHHHHHHH
RSALEIEPNNEKAQNNLALIYLAAGDIKKATNVFMRHMEAPEALNNVGYFLILQGKPDEA
HHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCHH
IPYLQQAIDKKASYYKVANDNLNRALSEVREMEQ
HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRVSRYFLALLVFVILGCASSDEPTNQFDAELYSGKPIDTLSSDDPPLSEKEAIMRGDV
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCE
ALRDNNIDLALYEYIRSLSFPEKEFHDKTLFTIGQIHSSRGNYALSEKAYLAALDFNPAH
EEECCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCEEECCCEEEEEEECCHHH
TEVLEQLGVLYTKQRRKEEGRSYFFKAINADQVRLKSSETITNYQALSQSEVAGLKVDSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCHHHHCCEEECCC
SPELAFMGIGVLEDVDGKHQIAQEYFKKSLTIDKSSVKALLNMGYSHYMYGNYKEAYQYT
CCCCCEEECCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHEECCCHHHHHHHH
RSALEIEPNNEKAQNNLALIYLAAGDIKKATNVFMRHMEAPEALNNVGYFLILQGKPDEA
HHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCHH
IPYLQQAIDKKASYYKVANDNLNRALSEVREMEQ
HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA