Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218710396
Identifier: 218710396
GI number: 218710396
Start: 2603209
End: 2604981
Strand: Reverse
Name: 218710396
Synonym: VS_2433
Alternate gene names: NA
Gene position: 2604981-2603209 (Counterclockwise)
Preceding gene: 218710397
Following gene: 218710395
Centisome position: 78.96
GC content: 34.69
Gene sequence:
>1773_bases ATGAAAAGGATATTCATCTTGCCTAAGAGTGAAAGTTTTAATAAAGATATCATCATTATTTCTGTTGTTTGGTTGCTGTG TGCGACTGCGATATTTTTCTATCAATGGGAGAGTATCTCAACACTGGTTTTAAATGATAATGACGATTACATGCGCTTTG TTCAATTCCAAGAGTGGATGAATAATGGGCGCTGGTATCTAAAACCAATGGATAACTTCAATGCAGCTGATGGTATTGTT ATCCATTGGTCCCGATTCCCCGATCTGATACTTTCTGCTATTGCGTACCCTTTATTGTTTGTTGTGGATGAAAGTACCGC TTATTCACTGTCTATTTCTATTGTACCTTTGCTTTATTTACTGTTCTATTCACTGTCATGCTTCTATTTATGTAACCATT ACTTCGGAGAGCGCTATCGGTTTTTGAGTATGATGTTTGCTCTGTTTTCCCCATCGGTTATGCATTTTATTCCTGGCTCC ATAGATCACCATAATATTCAGCTTATTTTGGCTATCTTGTTCCTATCTCTAACACCTATAACTGTAAGTCAAATTAATCA ATTATGGCGAGTGTATGCTCAATCTATTCTATTGGCATTGTCGTTATGGACTGGGTTAGACAATATCCTTTTGTTTGCGA GTTTTTTTATCGTCTACACTGTGTATTGTTTTTTTGTTAGCAAGATTTGGTTTGTTTATGTATCAAGGCTATATCTGTTC TGCTGTGTTTCAGTTGTTATCTCCGTTTTATTAAACAGACCTTATAATGAGTTCTTTGATTTTAAGTACGATGAAGTGTC GTTTGTTATTGTGGTTTTGTTTTTTGTTGGTTGGGCTTTTGTTAATAATTACAATTGGTTTAAATTTGATAGTTGGCCTT TTTGGTTGCGTTCGTTTGTGTTTGTTATATTGGGTGTTGGATATGTGACTCCAGTAGCTTTGTTATATCCAAATATTACC AGTGCTTTGTTTGTCGATTATCCACCTATACTTCAGACTTATTGGCTTGACCATGTTTCTGAAGCTAAATCAATTTTTCA GTATATAAGTGAGAATGGATTATTATCTATTGATAATTATGTGTTACTGGTCATTCCTGCTTTATTGTATCCTTTTTTTA GAGTTAACAATCATCATTGTACAATCTTGTATATTATTTTCTTATTGAATTTATTCCTTGCCATATTCTGGCAGGTTAGG GTGATAAGATTATGTTTTATTTTATCAAGCCCTTTTCAGGCTTACGTAGTTATAAGATTGTCTGATTTTGTAAAATATTC AATATTTAAAGTGTTAATTATATTGTTAGGAGCTCCATTAGTGATGGCATTTCTAGTGATAGCGGTTGGTAATGATGACT TCGAAAGAAATGCGGTTGAAAATGACAAAAAAACTCTATTTAGAGTATTGGAAGAAAAGGGCATCGAATCAAAGGTTATT CTTACTGGGATTGAGACGGGAGCACCTGTGTTGGCACACACTAATAACCGCATAATTGCAGCCCCTTATCATAGAAATAT CGTTGGTAATCAATTTCTTATAGAGGTTATGTTGGAGGAGGATATGAGTTTAGCCAAGGACGAAATCCAAGCTAAGAACA TTGATTATATTGTTATAGGAAATGACGCCCACTTAATGGTTTTGAAAAAATCAGCAAGTGAAGAGGCTCTTATAAACAAA TTATACAGCTCAAATGTTCCCAACTGGTTGGAGACCATATATGACGATGTTCCTGATGGCTACCGAATCTTTAGGGTTAG GGAGAGTTTATGA
Upstream 100 bases:
>100_bases AAGCATCTTATTATAAAGTAGCGAATGACAACTTAAATAGAGCGTTATCTGAGGTAAGAGAGATGGAGCAGTAACGACTT AAATTATTATCTTTGGGTTA
Downstream 100 bases:
>100_bases ATAGTATAAAAGTTGCAGTATTACTCCCATGTTTTAATGAAGCGGGTGCTATCGGAAAGACAGTTATGTCTTTTAAGCAG GCTTTACCTGATGCGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWMNNGRWYLKPMDNFNAADGIV IHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYLLFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGS IDHHNIQLILAILFLSLTPITVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFVFVILGVGYVTPVALLYPNIT SALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNYVLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVR VIRLCFILSSPFQAYVVIRLSDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIGNDAHLMVLKKSASEEALINK LYSSNVPNWLETIYDDVPDGYRIFRVRESL
Sequences:
>Translated_590_residues MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWMNNGRWYLKPMDNFNAADGIV IHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYLLFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGS IDHHNIQLILAILFLSLTPITVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFVFVILGVGYVTPVALLYPNIT SALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNYVLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVR VIRLCFILSSPFQAYVVIRLSDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIGNDAHLMVLKKSASEEALINK LYSSNVPNWLETIYDDVPDGYRIFRVRESL >Mature_590_residues MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWMNNGRWYLKPMDNFNAADGIV IHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYLLFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGS IDHHNIQLILAILFLSLTPITVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFVFVILGVGYVTPVALLYPNIT SALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNYVLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVR VIRLCFILSSPFQAYVVIRLSDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIGNDAHLMVLKKSASEEALINK LYSSNVPNWLETIYDDVPDGYRIFRVRESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68709; Mature: 68709
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWM CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH NNGRWYLKPMDNFNAADGIVIHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYL CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHH LFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGSIDHHNIQLILAILFLSLTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC TVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFV HHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH FVILGVGYVTPVALLYPNITSALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNY HHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH VLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVRVIRLCFILSSPFQAYVVIRL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH SDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEE LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIG EEECCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC NDAHLMVLKKSASEEALINKLYSSNVPNWLETIYDDVPDGYRIFRVRESL CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWM CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH NNGRWYLKPMDNFNAADGIVIHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYL CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHH LFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGSIDHHNIQLILAILFLSLTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC TVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFV HHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH FVILGVGYVTPVALLYPNITSALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNY HHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH VLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVRVIRLCFILSSPFQAYVVIRL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH SDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEE LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIG EEECCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC NDAHLMVLKKSASEEALINKLYSSNVPNWLETIYDDVPDGYRIFRVRESL CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA