Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710396

Identifier: 218710396

GI number: 218710396

Start: 2603209

End: 2604981

Strand: Reverse

Name: 218710396

Synonym: VS_2433

Alternate gene names: NA

Gene position: 2604981-2603209 (Counterclockwise)

Preceding gene: 218710397

Following gene: 218710395

Centisome position: 78.96

GC content: 34.69

Gene sequence:

>1773_bases
ATGAAAAGGATATTCATCTTGCCTAAGAGTGAAAGTTTTAATAAAGATATCATCATTATTTCTGTTGTTTGGTTGCTGTG
TGCGACTGCGATATTTTTCTATCAATGGGAGAGTATCTCAACACTGGTTTTAAATGATAATGACGATTACATGCGCTTTG
TTCAATTCCAAGAGTGGATGAATAATGGGCGCTGGTATCTAAAACCAATGGATAACTTCAATGCAGCTGATGGTATTGTT
ATCCATTGGTCCCGATTCCCCGATCTGATACTTTCTGCTATTGCGTACCCTTTATTGTTTGTTGTGGATGAAAGTACCGC
TTATTCACTGTCTATTTCTATTGTACCTTTGCTTTATTTACTGTTCTATTCACTGTCATGCTTCTATTTATGTAACCATT
ACTTCGGAGAGCGCTATCGGTTTTTGAGTATGATGTTTGCTCTGTTTTCCCCATCGGTTATGCATTTTATTCCTGGCTCC
ATAGATCACCATAATATTCAGCTTATTTTGGCTATCTTGTTCCTATCTCTAACACCTATAACTGTAAGTCAAATTAATCA
ATTATGGCGAGTGTATGCTCAATCTATTCTATTGGCATTGTCGTTATGGACTGGGTTAGACAATATCCTTTTGTTTGCGA
GTTTTTTTATCGTCTACACTGTGTATTGTTTTTTTGTTAGCAAGATTTGGTTTGTTTATGTATCAAGGCTATATCTGTTC
TGCTGTGTTTCAGTTGTTATCTCCGTTTTATTAAACAGACCTTATAATGAGTTCTTTGATTTTAAGTACGATGAAGTGTC
GTTTGTTATTGTGGTTTTGTTTTTTGTTGGTTGGGCTTTTGTTAATAATTACAATTGGTTTAAATTTGATAGTTGGCCTT
TTTGGTTGCGTTCGTTTGTGTTTGTTATATTGGGTGTTGGATATGTGACTCCAGTAGCTTTGTTATATCCAAATATTACC
AGTGCTTTGTTTGTCGATTATCCACCTATACTTCAGACTTATTGGCTTGACCATGTTTCTGAAGCTAAATCAATTTTTCA
GTATATAAGTGAGAATGGATTATTATCTATTGATAATTATGTGTTACTGGTCATTCCTGCTTTATTGTATCCTTTTTTTA
GAGTTAACAATCATCATTGTACAATCTTGTATATTATTTTCTTATTGAATTTATTCCTTGCCATATTCTGGCAGGTTAGG
GTGATAAGATTATGTTTTATTTTATCAAGCCCTTTTCAGGCTTACGTAGTTATAAGATTGTCTGATTTTGTAAAATATTC
AATATTTAAAGTGTTAATTATATTGTTAGGAGCTCCATTAGTGATGGCATTTCTAGTGATAGCGGTTGGTAATGATGACT
TCGAAAGAAATGCGGTTGAAAATGACAAAAAAACTCTATTTAGAGTATTGGAAGAAAAGGGCATCGAATCAAAGGTTATT
CTTACTGGGATTGAGACGGGAGCACCTGTGTTGGCACACACTAATAACCGCATAATTGCAGCCCCTTATCATAGAAATAT
CGTTGGTAATCAATTTCTTATAGAGGTTATGTTGGAGGAGGATATGAGTTTAGCCAAGGACGAAATCCAAGCTAAGAACA
TTGATTATATTGTTATAGGAAATGACGCCCACTTAATGGTTTTGAAAAAATCAGCAAGTGAAGAGGCTCTTATAAACAAA
TTATACAGCTCAAATGTTCCCAACTGGTTGGAGACCATATATGACGATGTTCCTGATGGCTACCGAATCTTTAGGGTTAG
GGAGAGTTTATGA

Upstream 100 bases:

>100_bases
AAGCATCTTATTATAAAGTAGCGAATGACAACTTAAATAGAGCGTTATCTGAGGTAAGAGAGATGGAGCAGTAACGACTT
AAATTATTATCTTTGGGTTA

Downstream 100 bases:

>100_bases
ATAGTATAAAAGTTGCAGTATTACTCCCATGTTTTAATGAAGCGGGTGCTATCGGAAAGACAGTTATGTCTTTTAAGCAG
GCTTTACCTGATGCGTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWMNNGRWYLKPMDNFNAADGIV
IHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYLLFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGS
IDHHNIQLILAILFLSLTPITVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF
CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFVFVILGVGYVTPVALLYPNIT
SALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNYVLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVR
VIRLCFILSSPFQAYVVIRLSDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI
LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIGNDAHLMVLKKSASEEALINK
LYSSNVPNWLETIYDDVPDGYRIFRVRESL

Sequences:

>Translated_590_residues
MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWMNNGRWYLKPMDNFNAADGIV
IHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYLLFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGS
IDHHNIQLILAILFLSLTPITVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF
CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFVFVILGVGYVTPVALLYPNIT
SALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNYVLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVR
VIRLCFILSSPFQAYVVIRLSDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI
LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIGNDAHLMVLKKSASEEALINK
LYSSNVPNWLETIYDDVPDGYRIFRVRESL
>Mature_590_residues
MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWMNNGRWYLKPMDNFNAADGIV
IHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYLLFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGS
IDHHNIQLILAILFLSLTPITVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF
CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFVFVILGVGYVTPVALLYPNIT
SALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNYVLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVR
VIRLCFILSSPFQAYVVIRLSDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI
LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIGNDAHLMVLKKSASEEALINK
LYSSNVPNWLETIYDDVPDGYRIFRVRESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68709; Mature: 68709

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWM
CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
NNGRWYLKPMDNFNAADGIVIHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYL
CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHH
LFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGSIDHHNIQLILAILFLSLTPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
TVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFV
HHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH
FVILGVGYVTPVALLYPNITSALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNY
HHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH
VLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVRVIRLCFILSSPFQAYVVIRL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
SDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEE
LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIG
EEECCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
NDAHLMVLKKSASEEALINKLYSSNVPNWLETIYDDVPDGYRIFRVRESL
CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MKRIFILPKSESFNKDIIIISVVWLLCATAIFFYQWESISTLVLNDNDDYMRFVQFQEWM
CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
NNGRWYLKPMDNFNAADGIVIHWSRFPDLILSAIAYPLLFVVDESTAYSLSISIVPLLYL
CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHH
LFYSLSCFYLCNHYFGERYRFLSMMFALFSPSVMHFIPGSIDHHNIQLILAILFLSLTPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
TVSQINQLWRVYAQSILLALSLWTGLDNILLFASFFIVYTVYCFFVSKIWFVYVSRLYLF
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CCVSVVISVLLNRPYNEFFDFKYDEVSFVIVVLFFVGWAFVNNYNWFKFDSWPFWLRSFV
HHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH
FVILGVGYVTPVALLYPNITSALFVDYPPILQTYWLDHVSEAKSIFQYISENGLLSIDNY
HHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCH
VLLVIPALLYPFFRVNNHHCTILYIIFLLNLFLAIFWQVRVIRLCFILSSPFQAYVVIRL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
SDFVKYSIFKVLIILLGAPLVMAFLVIAVGNDDFERNAVENDKKTLFRVLEEKGIESKVI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEE
LTGIETGAPVLAHTNNRIIAAPYHRNIVGNQFLIEVMLEEDMSLAKDEIQAKNIDYIVIG
EEECCCCCCEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
NDAHLMVLKKSASEEALINKLYSSNVPNWLETIYDDVPDGYRIFRVRESL
CCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA