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The map label for this gene is 218710300

Identifier: 218710300

GI number: 218710300

Start: 2501040

End: 2501363

Strand: Reverse

Name: 218710300

Synonym: VS_2334

Alternate gene names: NA

Gene position: 2501363-2501040 (Counterclockwise)

Preceding gene: 218710301

Following gene: 218710299

Centisome position: 75.81

GC content: 46.3

Gene sequence:

>324_bases
ATGGAATATGCAATGAAGAAAATTACACTAGGATTAGTTCTTGGATTTGGACTATTGAGTGGTAACGCTCTGGCGGGTGA
TGTTGCTGCGGGTCAAGCTAAAGCGGCAATCTGTGCGGCTTGTCATGGCGCAGACGGTATCGCAATGATCCCAGGATATC
CAAATCTTAAAGGCCAAAACGAGCAATACATCGCTTCATCAATTAAGGCATATAAGAACGGCCAGCGCACCGGCGGTTTG
GCGGCTGTAATGCAGGCTCAGGCTTCAATGCTGAGTGATGAAGATATTGCTAATCTAGCTGCTTACTACTCAAGCCTTAA
GTAA

Upstream 100 bases:

>100_bases
TTCGTAGATAAAAACTACGAAGGTCAAGATTGTGAAGCGCTTTGGAGCAAGTAGAAAAAGTTTGTGTCACAATTCACCGT
CACTTTAATAAAAATAATTA

Downstream 100 bases:

>100_bases
AACCTTCTTAAAGCGCTGATTAAACAAGATGATAAATTTCGAGCCAGAGCTTTAATGCTCTGGCTTTTTTCATTGAATGT
TTACTATAGCTAACCGATAA

Product: cytochrome c553

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MEYAMKKITLGLVLGFGLLSGNALAGDVAAGQAKAAICAACHGADGIAMIPGYPNLKGQNEQYIASSIKAYKNGQRTGGL
AAVMQAQASMLSDEDIANLAAYYSSLK

Sequences:

>Translated_107_residues
MEYAMKKITLGLVLGFGLLSGNALAGDVAAGQAKAAICAACHGADGIAMIPGYPNLKGQNEQYIASSIKAYKNGQRTGGL
AAVMQAQASMLSDEDIANLAAYYSSLK
>Mature_107_residues
MEYAMKKITLGLVLGFGLLSGNALAGDVAAGQAKAAICAACHGADGIAMIPGYPNLKGQNEQYIASSIKAYKNGQRTGGL
AAVMQAQASMLSDEDIANLAAYYSSLK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10959; Mature: 10959

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYAMKKITLGLVLGFGLLSGNALAGDVAAGQAKAAICAACHGADGIAMIPGYPNLKGQN
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC
EQYIASSIKAYKNGQRTGGLAAVMQAQASMLSDEDIANLAAYYSSLK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYAMKKITLGLVLGFGLLSGNALAGDVAAGQAKAAICAACHGADGIAMIPGYPNLKGQN
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC
EQYIASSIKAYKNGQRTGGLAAVMQAQASMLSDEDIANLAAYYSSLK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]