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The map label for this gene is 218709274

Identifier: 218709274

GI number: 218709274

Start: 1378325

End: 1378807

Strand: Direct

Name: 218709274

Synonym: VS_1281

Alternate gene names: NA

Gene position: 1378325-1378807 (Clockwise)

Preceding gene: 218709273

Following gene: 218709277

Centisome position: 41.78

GC content: 43.89

Gene sequence:

>483_bases
ATGGACACCATTATCAAACAAGCAATCGAATTGCGAAAAGAAGAGAAGTACCAAGAGTCACGTGACTTGTTGGCAACGCT
ACTCACTGATGAAAATTATGCCGCGAAAGCGCACTTGCAGATCGCGTGGTCTTACGATAATCAAGGTAAAGAGCGACAGG
CGATTGAGCATTATGTGCTATCTCTGTCTGGCGTGCTTTCTTCAGTAGAGCGTTTTGATGCGCTGTTCGGTTTGTCGAGT
ACTTATCGAAGCCTTGGTCTTTATGCAGAGGCTTTAGGCTATTTCGAACAGACTATGGCTGAATATCCTGACTCGATAGA
GGTGAAACCTTTCTACGCAATGTGTTTGTACAATTTGGATCGCCATAAAGAGGCGACGTCGCTGTTACTTGAGCTTTTGG
TATCTACGACTAATAGCGATGCGATTAAAGAGTACCAACGCGCGATCTCTTTATATGCTCAAGACTTAGATAAAACCTGG
TAA

Upstream 100 bases:

>100_bases
CAGTGAGAACCCTGCTATTAAGCTTTATCAATCAAAAGGTTTTACTCAGTTGTCCGAAGTGAAAGGACTCGTTGAAATGG
AACTGATTTTAGGAAGAACT

Downstream 100 bases:

>100_bases
GCCGCTGCTTATAAAGATCATGTACTAATATAGAAAAAGCCTAAGTATTAATAGGATACTTAGGCTTCAAGAATTCGGTT
TTAGTTTGAGTTTAAACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat Protein; Tetratricopeptide Tpr_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Chloramphenicol Acetyltransferase; TPR Domain-Containing Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDTIIKQAIELRKEEKYQESRDLLATLLTDENYAAKAHLQIAWSYDNQGKERQAIEHYVLSLSGVLSSVERFDALFGLSS
TYRSLGLYAEALGYFEQTMAEYPDSIEVKPFYAMCLYNLDRHKEATSLLLELLVSTTNSDAIKEYQRAISLYAQDLDKTW

Sequences:

>Translated_160_residues
MDTIIKQAIELRKEEKYQESRDLLATLLTDENYAAKAHLQIAWSYDNQGKERQAIEHYVLSLSGVLSSVERFDALFGLSS
TYRSLGLYAEALGYFEQTMAEYPDSIEVKPFYAMCLYNLDRHKEATSLLLELLVSTTNSDAIKEYQRAISLYAQDLDKTW
>Mature_160_residues
MDTIIKQAIELRKEEKYQESRDLLATLLTDENYAAKAHLQIAWSYDNQGKERQAIEHYVLSLSGVLSSVERFDALFGLSS
TYRSLGLYAEALGYFEQTMAEYPDSIEVKPFYAMCLYNLDRHKEATSLLLELLVSTTNSDAIKEYQRAISLYAQDLDKTW

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18411; Mature: 18411

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIIKQAIELRKEEKYQESRDLLATLLTDENYAAKAHLQIAWSYDNQGKERQAIEHYVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
SLSGVLSSVERFDALFGLSSTYRSLGLYAEALGYFEQTMAEYPDSIEVKPFYAMCLYNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
RHKEATSLLLELLVSTTNSDAIKEYQRAISLYAQDLDKTW
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTIIKQAIELRKEEKYQESRDLLATLLTDENYAAKAHLQIAWSYDNQGKERQAIEHYVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
SLSGVLSSVERFDALFGLSSTYRSLGLYAEALGYFEQTMAEYPDSIEVKPFYAMCLYNLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
RHKEATSLLLELLVSTTNSDAIKEYQRAISLYAQDLDKTW
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA