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The map label for this gene is 218709277

Identifier: 218709277

GI number: 218709277

Start: 1381280

End: 1382098

Strand: Direct

Name: 218709277

Synonym: VS_1284

Alternate gene names: NA

Gene position: 1381280-1382098 (Clockwise)

Preceding gene: 218709274

Following gene: 218709278

Centisome position: 41.87

GC content: 46.4

Gene sequence:

>819_bases
ATGGACGAAATGAGTGAGTTGCTGTTGTTGATTTTATACTGTGCATTATTAGGCAGTGGTGTTGGTTTTCTTGCCGGACT
TTTGGGGATTGGCGGAGGGCTTATCATTGTACCTGTGTTAAGCAGCATTTTACTTCACTTAGAAGTTTTACCTGCTGACC
AAGTGGTCGTTGCAGCGATTGCGACTTCCTTGGCATCAATTTTGTTTACCTCAACTTCTTCTGCGCTTGCTCACCACAAA
AATGGAAACGTGCCTTGGGATTTGGCACCTTGGATCATGTTAGGTGTTGCTCTGGGTGCATTGATTAGTGGCTTTATGGC
GGCTCTTTTACCGGAAAAAGTTGTTCGTATTGTGTTTGCCGTAAGTGTGGTTCTCATTGCGATAAAGATGTTCTTAAGCA
GCAAAAGCGATACGCCTAAAGAACGAAAACTGCCGAACAAGGGCGTACTAACGGTTCTTACAACTATTACGGGCGGCTTG
TCAGCCATGATAGGCATTGGTGGTGGGGCATTGCTGGTTCCGCTATTGACGTTCTTCTCTGTCGATATGAAAAAGGCGAT
TGGTTGTGCGTCGGCTTGTGGCATTGTCATCGCGTTGTTTGGCTCGATAGGTTACATCAGTTCAGGCAGCAGCCACTTTG
CGCTAACCGACGGTTTTGCTGGCTTTGTTTATTTGCCTGCGCTGCTAGGCATCGTGTGCACATCTTGGTTTACAGCTCCG
CTAGGCGCAAAAGCAACTAACCATTTACCGGTTCCAACGATTAAGAAGATCTTCTCAGTACTGTTGGTGGTTATCGCAGC
AAGTATGGTTGCTCGTTAA

Upstream 100 bases:

>100_bases
TGTTTGAAAATATTAGGTGGTGTCAGTTATATTAATTGGCTTGATGGAAATATAACCACATTAATAGTGCGTTATTTAAG
ACAATTAATTTAATTAAGAG

Downstream 100 bases:

>100_bases
TTAAAGAATTCAGTAACCTGTAACTGATTCAGTTTCTTTATTCATTAGACATTTAGGTGCGAAAAAATGCATGTAAATGT
CTAATTGCGATCTGAGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MDEMSELLLLILYCALLGSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAIATSLASILFTSTSSALAHHK
NGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSDTPKERKLPNKGVLTVLTTITGGL
SAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAP
LGAKATNHLPVPTIKKIFSVLLVVIAASMVAR

Sequences:

>Translated_272_residues
MDEMSELLLLILYCALLGSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAIATSLASILFTSTSSALAHHK
NGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSDTPKERKLPNKGVLTVLTTITGGL
SAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAP
LGAKATNHLPVPTIKKIFSVLLVVIAASMVAR
>Mature_272_residues
MDEMSELLLLILYCALLGSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAIATSLASILFTSTSSALAHHK
NGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFAVSVVLIAIKMFLSSKSDTPKERKLPNKGVLTVLTTITGGL
SAMIGIGGGALLVPLLTFFSVDMKKAIGCASACGIVIALFGSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAP
LGAKATNHLPVPTIKKIFSVLLVVIAASMVAR

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27985; Mature: 27985

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEMSELLLLILYCALLGSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAI
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATSLASILFTSTSSALAHHKNGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVVLIAIKMFLSSKSDTPKERKLPNKGVLTVLTTITGGLSAMIGIGGGALLVPLLTFFS
HHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VDMKKAIGCASACGIVIALFGSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCC
LGAKATNHLPVPTIKKIFSVLLVVIAASMVAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEMSELLLLILYCALLGSGVGFLAGLLGIGGGLIIVPVLSSILLHLEVLPADQVVVAAI
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
ATSLASILFTSTSSALAHHKNGNVPWDLAPWIMLGVALGALISGFMAALLPEKVVRIVFA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSVVLIAIKMFLSSKSDTPKERKLPNKGVLTVLTTITGGLSAMIGIGGGALLVPLLTFFS
HHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VDMKKAIGCASACGIVIALFGSIGYISSGSSHFALTDGFAGFVYLPALLGIVCTSWFTAP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCC
LGAKATNHLPVPTIKKIFSVLLVVIAASMVAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]