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The map label for this gene is 218709240

Identifier: 218709240

GI number: 218709240

Start: 1339898

End: 1342066

Strand: Direct

Name: 218709240

Synonym: VS_1247

Alternate gene names: NA

Gene position: 1339898-1342066 (Clockwise)

Preceding gene: 218709239

Following gene: 218709241

Centisome position: 40.61

GC content: 48.32

Gene sequence:

>2169_bases
ATGAGCTATCAACCACTTTTACTTAACTTTGAGGAAGCAGCAGAGCTTCGTAAAGAACTTGGCAAGGATAGCCTTTTAGG
TAACGCACTGACTCGCGATATTAAACAAACTGACGCTTACATGGCGGAAGTTGGCATTGAAGTACCAGGTCACGGTGAAG
GCGGCGGTTACGAGCACAACCGTCACAAGCAAAACTACATCCATATGGATCTAGCGGGCCGTTTGTTCCTTATCACTGAG
GAAACAAAGTACCGTGATTACATCGTTGATATGCTAACAGCGTACGCGACGGTGTACCCAACACTTGAAAGCAACGTAAG
CCGTGACTCTAACCCTCCGGGTAAGCTGTTCCACCAAACGTTGAACGAGAACATGTGGATGCTTTACGCTTCTTGTGCGT
ACAGCTGTATTTACCACACCATTTCTGAAGAGCAAAAGCGTCTGATCGAAGACGATCTTCTTAAGCAAATGATCGAAATG
TTCGTTGTGACTTACGCACACGACTTCGATATCGTACACAACCACGGCTTATGGGCTGTGGCAGCGGTAGGTATCTGTGG
TTACGCAATCAACGATCAAGAGTCAGTAGACAAAGCGCTTTACGGCCTGAAACTCGACAAAGTAAGCGGTGGTTTCTTAG
CGCAACTTGACCAACTGTTCTCGCCAGACGGCTACTACATGGAAGGTCCTTACTACCACCGTTTCTCACTACGTCCAATC
TACTTGTTCGCAGAAGCGATTGAACGTCGTCAGCCAGATCTTGGTATTTACGAATTCAACGACTCAGTGATCAAGACAAC
GTCTTACGCGGTATTCAAAACGGCATTCCCAGACGGTACATTGCCAGCTCTGAACGATTCATCGAAGACGATTTCTATTA
ACGATGAAGGCGTTATTATGGCAACGTCTGTGTGTTACCACCGCTATGAGCAGACTGAAACTTTACTTGGTATGGCTAAT
CACCAACAAGATGTTTGGGTCCATGCTTCAGGTAAAACGCTATCTGACGCTGTCAATGCAGCAGACGACATCAAAGCATT
CAACTGGGGTAGCCTGTTTGTAACGGACGGCCCTGAAGGCGAAAAAGGCGGCGTAAGCATTCTTCGTCACCGTGACGAAC
AAGACGATGACCCTAAGACCGCAGATACAATGGCGTTGATCTGGTTTGGTCAACACGGCAGCGATCACCAGTACCACTCT
GCGCTAGACCACGGTCACTACGATGGGCTACACCTAAGCGTATTCAACCGTGGCCACGAAGTGCTGCACGATTACGGCTT
CGGTCGCTGGGTAAACGTTGAGCCTAAGTTTGGCGGTCGTTACATCCCAGAGAACAAGTCTTACTGTAAGCAGACAGTTG
CTCACAACACAGTAACGGTTGATCAGAAAACACAGAACAACTTCGATACGGCATTGGCTGAATCTAAGTTTGGTCAGAAG
CACTTCTTCGTAGCAGACGACCAGTCTCTGCAAGGTATGAGCGGCACAATTTCTGAGTACTACACCGGCGTAGACATGCA
ACGCAGCGTGATTCTTGCTGAACTTCCTGAGTTCGAGAAGCCACTAGTTATCGATGTATACCGCATCGAAGCTGACGCTG
AACACCAGTACGACCTACCCGTTCACCACTCGGGTCAAATCATCCGTACTGACTTCGACTACAACATCGAAAGCACGCTG
AAGCCGCTAGGTGAAGACAACGGTTACCAGCACTTATGGAACGTTGCTTCAGGCAAAGTGAACCAAGAGGGCTCTCTGGT
GAGCTGGCTACATGACAGCAGCTACTACAGCCTAGTAACCAGCGCGAATGCGGGCAGTGAAGTAATCTTTGCTCGCACTG
GTGCTAACGATCCAGACTTTAACCTTAAGAGTGAGCCTGCGCTTATCTTACGTCAGTCTGGTCAAAACCACGTGTTTGCT
TCTGTACTAGAAACGCATGGTTACTTTAACGAGTCTATCGAAGCCTCTGTAGGCGCTCGTGGTCTGGTTAAATCAGTGTC
TGTTGTGGGCCATAACAGTGTCGGGACTGTTGTTCGCATTCAGACTACTTCTGGTAATACTTACCACTACGGTATTTCAA
ACCAAGCTGAAGACACGCAGCAAGCAACTCACACTGTTGAGTTCGCGGGTGAGACATACTCGTGGGAAGGGTCATTTGCT
CAACTGTAA

Upstream 100 bases:

>100_bases
TAGAACTGAACGGTAAAGTATACAGCTGGACAGGATTCTACTCAGTAGAAACAATTTTAAACCCAGAATTAGCAAGCACA
GCAGAGCAGGGGAAATAATA

Downstream 100 bases:

>100_bases
ATGATTAACATACATGCTGTTTAACGAGGGCATGTATTGATGTGGTGCTTTGCGGGAACGAAGCATCACATTGAAATTCA
GTCGTGATTGAAAAATAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Chondroitin AC/Alginate Lyase; Heparinase II/III-Like Protein; Alginate Lyase; Chondroitin AC/Alginate Lyase Domain-Containing Protein; Heparinase II/III-Like

Number of amino acids: Translated: 722; Mature: 721

Protein sequence:

>722_residues
MSYQPLLLNFEEAAELRKELGKDSLLGNALTRDIKQTDAYMAEVGIEVPGHGEGGGYEHNRHKQNYIHMDLAGRLFLITE
ETKYRDYIVDMLTAYATVYPTLESNVSRDSNPPGKLFHQTLNENMWMLYASCAYSCIYHTISEEQKRLIEDDLLKQMIEM
FVVTYAHDFDIVHNHGLWAVAAVGICGYAINDQESVDKALYGLKLDKVSGGFLAQLDQLFSPDGYYMEGPYYHRFSLRPI
YLFAEAIERRQPDLGIYEFNDSVIKTTSYAVFKTAFPDGTLPALNDSSKTISINDEGVIMATSVCYHRYEQTETLLGMAN
HQQDVWVHASGKTLSDAVNAADDIKAFNWGSLFVTDGPEGEKGGVSILRHRDEQDDDPKTADTMALIWFGQHGSDHQYHS
ALDHGHYDGLHLSVFNRGHEVLHDYGFGRWVNVEPKFGGRYIPENKSYCKQTVAHNTVTVDQKTQNNFDTALAESKFGQK
HFFVADDQSLQGMSGTISEYYTGVDMQRSVILAELPEFEKPLVIDVYRIEADAEHQYDLPVHHSGQIIRTDFDYNIESTL
KPLGEDNGYQHLWNVASGKVNQEGSLVSWLHDSSYYSLVTSANAGSEVIFARTGANDPDFNLKSEPALILRQSGQNHVFA
SVLETHGYFNESIEASVGARGLVKSVSVVGHNSVGTVVRIQTTSGNTYHYGISNQAEDTQQATHTVEFAGETYSWEGSFA
QL

Sequences:

>Translated_722_residues
MSYQPLLLNFEEAAELRKELGKDSLLGNALTRDIKQTDAYMAEVGIEVPGHGEGGGYEHNRHKQNYIHMDLAGRLFLITE
ETKYRDYIVDMLTAYATVYPTLESNVSRDSNPPGKLFHQTLNENMWMLYASCAYSCIYHTISEEQKRLIEDDLLKQMIEM
FVVTYAHDFDIVHNHGLWAVAAVGICGYAINDQESVDKALYGLKLDKVSGGFLAQLDQLFSPDGYYMEGPYYHRFSLRPI
YLFAEAIERRQPDLGIYEFNDSVIKTTSYAVFKTAFPDGTLPALNDSSKTISINDEGVIMATSVCYHRYEQTETLLGMAN
HQQDVWVHASGKTLSDAVNAADDIKAFNWGSLFVTDGPEGEKGGVSILRHRDEQDDDPKTADTMALIWFGQHGSDHQYHS
ALDHGHYDGLHLSVFNRGHEVLHDYGFGRWVNVEPKFGGRYIPENKSYCKQTVAHNTVTVDQKTQNNFDTALAESKFGQK
HFFVADDQSLQGMSGTISEYYTGVDMQRSVILAELPEFEKPLVIDVYRIEADAEHQYDLPVHHSGQIIRTDFDYNIESTL
KPLGEDNGYQHLWNVASGKVNQEGSLVSWLHDSSYYSLVTSANAGSEVIFARTGANDPDFNLKSEPALILRQSGQNHVFA
SVLETHGYFNESIEASVGARGLVKSVSVVGHNSVGTVVRIQTTSGNTYHYGISNQAEDTQQATHTVEFAGETYSWEGSFA
QL
>Mature_721_residues
SYQPLLLNFEEAAELRKELGKDSLLGNALTRDIKQTDAYMAEVGIEVPGHGEGGGYEHNRHKQNYIHMDLAGRLFLITEE
TKYRDYIVDMLTAYATVYPTLESNVSRDSNPPGKLFHQTLNENMWMLYASCAYSCIYHTISEEQKRLIEDDLLKQMIEMF
VVTYAHDFDIVHNHGLWAVAAVGICGYAINDQESVDKALYGLKLDKVSGGFLAQLDQLFSPDGYYMEGPYYHRFSLRPIY
LFAEAIERRQPDLGIYEFNDSVIKTTSYAVFKTAFPDGTLPALNDSSKTISINDEGVIMATSVCYHRYEQTETLLGMANH
QQDVWVHASGKTLSDAVNAADDIKAFNWGSLFVTDGPEGEKGGVSILRHRDEQDDDPKTADTMALIWFGQHGSDHQYHSA
LDHGHYDGLHLSVFNRGHEVLHDYGFGRWVNVEPKFGGRYIPENKSYCKQTVAHNTVTVDQKTQNNFDTALAESKFGQKH
FFVADDQSLQGMSGTISEYYTGVDMQRSVILAELPEFEKPLVIDVYRIEADAEHQYDLPVHHSGQIIRTDFDYNIESTLK
PLGEDNGYQHLWNVASGKVNQEGSLVSWLHDSSYYSLVTSANAGSEVIFARTGANDPDFNLKSEPALILRQSGQNHVFAS
VLETHGYFNESIEASVGARGLVKSVSVVGHNSVGTVVRIQTTSGNTYHYGISNQAEDTQQATHTVEFAGETYSWEGSFAQ
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80935; Mature: 80803

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQPLLLNFEEAAELRKELGKDSLLGNALTRDIKQTDAYMAEVGIEVPGHGEGGGYEHN
CCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RHKQNYIHMDLAGRLFLITEETKYRDYIVDMLTAYATVYPTLESNVSRDSNPPGKLFHQT
CCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHH
LNENMWMLYASCAYSCIYHTISEEQKRLIEDDLLKQMIEMFVVTYAHDFDIVHNHGLWAV
HCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
AAVGICGYAINDQESVDKALYGLKLDKVSGGFLAQLDQLFSPDGYYMEGPYYHRFSLRPI
HHHHHHCEECCCHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCEECCCEEEEEECCHH
YLFAEAIERRQPDLGIYEFNDSVIKTTSYAVFKTAFPDGTLPALNDSSKTISINDEGVIM
HHHHHHHHHCCCCCCEEECCCCEEEECCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEE
ATSVCYHRYEQTETLLGMANHQQDVWVHASGKTLSDAVNAADDIKAFNWGSLFVTDGPEG
EHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCHHHCCEEECCEEEEECCCCC
EKGGVSILRHRDEQDDDPKTADTMALIWFGQHGSDHQYHSALDHGHYDGLHLSVFNRGHE
CCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEECCCHH
VLHDYGFGRWVNVEPKFGGRYIPENKSYCKQTVAHNTVTVDQKTQNNFDTALAESKFGQK
HHHHCCCCEEEEECCCCCCEECCCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCC
HFFVADDQSLQGMSGTISEYYTGVDMQRSVILAELPEFEKPLVIDVYRIEADAEHQYDLP
EEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC
VHHSGQIIRTDFDYNIESTLKPLGEDNGYQHLWNVASGKVNQEGSLVSWLHDSSYYSLVT
CCCCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
SANAGSEVIFARTGANDPDFNLKSEPALILRQSGQNHVFASVLETHGYFNESIEASVGAR
ECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHCCCCH
GLVKSVSVVGHNSVGTVVRIQTTSGNTYHYGISNQAEDTQQATHTVEFAGETYSWEGSFA
HHHHHHHEECCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHEEEEECCCEEECCCCCC
QL
CC
>Mature Secondary Structure 
SYQPLLLNFEEAAELRKELGKDSLLGNALTRDIKQTDAYMAEVGIEVPGHGEGGGYEHN
CCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RHKQNYIHMDLAGRLFLITEETKYRDYIVDMLTAYATVYPTLESNVSRDSNPPGKLFHQT
CCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHH
LNENMWMLYASCAYSCIYHTISEEQKRLIEDDLLKQMIEMFVVTYAHDFDIVHNHGLWAV
HCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
AAVGICGYAINDQESVDKALYGLKLDKVSGGFLAQLDQLFSPDGYYMEGPYYHRFSLRPI
HHHHHHCEECCCHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCEECCCEEEEEECCHH
YLFAEAIERRQPDLGIYEFNDSVIKTTSYAVFKTAFPDGTLPALNDSSKTISINDEGVIM
HHHHHHHHHCCCCCCEEECCCCEEEECCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEE
ATSVCYHRYEQTETLLGMANHQQDVWVHASGKTLSDAVNAADDIKAFNWGSLFVTDGPEG
EHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCHHHCCEEECCEEEEECCCCC
EKGGVSILRHRDEQDDDPKTADTMALIWFGQHGSDHQYHSALDHGHYDGLHLSVFNRGHE
CCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEECCCHH
VLHDYGFGRWVNVEPKFGGRYIPENKSYCKQTVAHNTVTVDQKTQNNFDTALAESKFGQK
HHHHCCCCEEEEECCCCCCEECCCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHCCCC
HFFVADDQSLQGMSGTISEYYTGVDMQRSVILAELPEFEKPLVIDVYRIEADAEHQYDLP
EEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC
VHHSGQIIRTDFDYNIESTLKPLGEDNGYQHLWNVASGKVNQEGSLVSWLHDSSYYSLVT
CCCCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEE
SANAGSEVIFARTGANDPDFNLKSEPALILRQSGQNHVFASVLETHGYFNESIEASVGAR
ECCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHCCCCH
GLVKSVSVVGHNSVGTVVRIQTTSGNTYHYGISNQAEDTQQATHTVEFAGETYSWEGSFA
HHHHHHHEECCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHEEEEECCCEEECCCCCC
QL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA