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The map label for this gene is 218709239

Identifier: 218709239

GI number: 218709239

Start: 1337685

End: 1339895

Strand: Direct

Name: 218709239

Synonym: VS_1246

Alternate gene names: NA

Gene position: 1337685-1339895 (Clockwise)

Preceding gene: 218709238

Following gene: 218709240

Centisome position: 40.54

GC content: 46.09

Gene sequence:

>2211_bases
GTGACAAAGAATATGACGACTAAACCAGTATTGTTGACTGAAGCAGAAATAGAGCAACTTCACCTTGAAGTGGGCCGTTC
TAGCTTAATGGGCAAAACCATTGCAGCGAACGCGAAAGACCTAGAAGCGTTCATGTGCTTACCTATTGATGTTCCTGGTC
ACGGAGAAGCGGGTGGTTACGAGCATAACCGCCATAAGCAAAACTACACGTACATGAACTTAGCTGGTCGCATGTTCTTG
ATCACTAAAGAGCAAAAGTACGCTGACTTTGTTACAGAACTACTAGAAGAGTACGCGGACAAATATCTAACGTTTGATTA
CCACGTACAGAAAAACACTAACCCTACAGGTCGTTTGTTCCACCAAATCTTGAACGAACACTGCTGGTTAATGTTCTCAA
GCTTGGCTTACTCTTGTGTTGCTTCAACACTGACACAAGAGCAGCGTGACAACATTGAATCGCGCATTTTCGAACCAATG
CTAGAAATGTTTACGGTTAAATACGCACACGACTTCGACCGCATTCACAACCACGGTATTTGGGCAGTAGCCGCTGTGGG
TATCTGTGGTCTTGCTCTAGGCAAGCGCGAGTACCTTGAAATGTCAGTGTACGGCATCGACCGTAACGATACTGGCGGCT
TTCTAGCTCAAATTTCTCAGCTGTTTGCACCTTCTGGTTACTACATGGAAGGCCCTTACTACCACCGTTACGCGATTCGC
CCAACGTGTGTGTTCGCTGAAGTGATTCACCGTCATATGCCTGAAGTTGATATCTACAACTACAAAGGCGGCGTGATTGG
TAACACGGTACAAGCAATGCTGGCGACAGCGTACCCGAACGGTGAATTCCCGGCTCTGAACGATGCATCTCGCACAATGG
GCATCACAGACATGGGTGTTCAAGTTGCCGTCAGTGTTTACAGCAAACATTACTCTTCAGAAAACGGCGTAGATCAAAAC
ATTCTTGGTATGGCGAAGATTCAAGACGCAGTATGGATGCACCCATGTGGTCTTGAGTTATCTAAAGCATACGAAGCGGC
TTCTGTTGAAAAAGAAATCGGCATGCCTTTCTGGCCAAGTGTTGAATTGAACGAAGGCCCTGAAGGTCACAACGGCGCGC
AAGGTTTTATCCGCATGCAGGATAAGAAAGGCGACGTTTCTCAGTTAGTGATGAACTACGGCCAACACGGCATGGGTCAC
GGCAACTTCGATACGCTGGGTATTTCTTTCTTCAACCGAGGTCAAGAAGTGCTACGTGAATACGGCTTCTGCCGTTGGGT
GAACGTTGAGCCAAAATTCGGCGGTCGTTACCTAGATGAAAACAAATCTTACGCACGTCAAACGATTGCTCATAATGCAG
TAACCATTGATGAAAAATGTCAGAATAACTTTGACGTTGAGCGTGCAGACTCAGTACACGGCTTGCCTCACTTCTTTAAA
GTAGAAGACGAGAAAATCAACGGCATGAGTGCATTTGCTAACGATCACTACCAAGGTTTTGACATGCAACGCAGCGTGTT
CATGTTAAACCTTGAAGAGCTTGAATCTCCGCTATTGTTAGACCTTTACCGCTTAGACTCTACAAAAGGCGGCGAAGGCG
AGCACCAATACGACTACTCACACCAATATGCAGGTCAGATTGTTCGCACTAACTTTGAATACCAAGCAAACAAAGAGTTA
AACACGCTAGGCAGCGATTTCGGTTATCAACACTTATGGAACGTCGCAAGTGGTGAAGTCAAGGGCACAGCACTTGTGAG
CTGGCTACAAAACAACACGTACTACACTTGGCTAGGCGCAACGTCTAACGACAATGCTGAAGTTGTCTTTACTCGCACTG
GTGCTAACGATCCAAGCTTCAACCTACGTTCAGAGCCTGCATTCATTTTACGTAGCAAAGGCGAAACAACACTGTTCGCT
TCTGTTCTAGAAACGCACGGTTACTTTAACGAAGAGTTCGAACAATCAGTAAATGCTCGCGGCGTTGTGAAAGACATCAA
GGTTGTAGCGCATACAAACGCCGGTTCAGTCGTCGAAATCACCACAGAGAAGTCAAATGTGACAGTGATGATCAGCAACC
AACTTGGCGCGACTGAGAGCACTGAACACAAAGTAGAACTGAACGGTAAAGTATACAGCTGGACAGGATTCTACTCAGTA
GAAACAATTTTAAACCCAGAATTAGCAAGCACAGCAGAGCAGGGGAAATAA

Upstream 100 bases:

>100_bases
ATTTTGCGACGAACAGGTACAATTAAAGCTAATATTGTATTACTTTATATGGAGTTTGAAAATTTAATCAAAGTTTAAAC
CGATAAACTCTTTATTGAGG

Downstream 100 bases:

>100_bases
TAATGAGCTATCAACCACTTTTACTTAACTTTGAGGAAGCAGCAGAGCTTCGTAAAGAACTTGGCAAGGATAGCCTTTTA
GGTAACGCACTGACTCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Chondroitin AC/Alginate Lyase; Heparinase II/III-Like Protein; Alginate Lyase; Chondroitin AC/Alginate Lyase Domain-Containing Protein; Heparinase II/III-Like

Number of amino acids: Translated: 736; Mature: 735

Protein sequence:

>736_residues
MTKNMTTKPVLLTEAEIEQLHLEVGRSSLMGKTIAANAKDLEAFMCLPIDVPGHGEAGGYEHNRHKQNYTYMNLAGRMFL
ITKEQKYADFVTELLEEYADKYLTFDYHVQKNTNPTGRLFHQILNEHCWLMFSSLAYSCVASTLTQEQRDNIESRIFEPM
LEMFTVKYAHDFDRIHNHGIWAVAAVGICGLALGKREYLEMSVYGIDRNDTGGFLAQISQLFAPSGYYMEGPYYHRYAIR
PTCVFAEVIHRHMPEVDIYNYKGGVIGNTVQAMLATAYPNGEFPALNDASRTMGITDMGVQVAVSVYSKHYSSENGVDQN
ILGMAKIQDAVWMHPCGLELSKAYEAASVEKEIGMPFWPSVELNEGPEGHNGAQGFIRMQDKKGDVSQLVMNYGQHGMGH
GNFDTLGISFFNRGQEVLREYGFCRWVNVEPKFGGRYLDENKSYARQTIAHNAVTIDEKCQNNFDVERADSVHGLPHFFK
VEDEKINGMSAFANDHYQGFDMQRSVFMLNLEELESPLLLDLYRLDSTKGGEGEHQYDYSHQYAGQIVRTNFEYQANKEL
NTLGSDFGYQHLWNVASGEVKGTALVSWLQNNTYYTWLGATSNDNAEVVFTRTGANDPSFNLRSEPAFILRSKGETTLFA
SVLETHGYFNEEFEQSVNARGVVKDIKVVAHTNAGSVVEITTEKSNVTVMISNQLGATESTEHKVELNGKVYSWTGFYSV
ETILNPELASTAEQGK

Sequences:

>Translated_736_residues
MTKNMTTKPVLLTEAEIEQLHLEVGRSSLMGKTIAANAKDLEAFMCLPIDVPGHGEAGGYEHNRHKQNYTYMNLAGRMFL
ITKEQKYADFVTELLEEYADKYLTFDYHVQKNTNPTGRLFHQILNEHCWLMFSSLAYSCVASTLTQEQRDNIESRIFEPM
LEMFTVKYAHDFDRIHNHGIWAVAAVGICGLALGKREYLEMSVYGIDRNDTGGFLAQISQLFAPSGYYMEGPYYHRYAIR
PTCVFAEVIHRHMPEVDIYNYKGGVIGNTVQAMLATAYPNGEFPALNDASRTMGITDMGVQVAVSVYSKHYSSENGVDQN
ILGMAKIQDAVWMHPCGLELSKAYEAASVEKEIGMPFWPSVELNEGPEGHNGAQGFIRMQDKKGDVSQLVMNYGQHGMGH
GNFDTLGISFFNRGQEVLREYGFCRWVNVEPKFGGRYLDENKSYARQTIAHNAVTIDEKCQNNFDVERADSVHGLPHFFK
VEDEKINGMSAFANDHYQGFDMQRSVFMLNLEELESPLLLDLYRLDSTKGGEGEHQYDYSHQYAGQIVRTNFEYQANKEL
NTLGSDFGYQHLWNVASGEVKGTALVSWLQNNTYYTWLGATSNDNAEVVFTRTGANDPSFNLRSEPAFILRSKGETTLFA
SVLETHGYFNEEFEQSVNARGVVKDIKVVAHTNAGSVVEITTEKSNVTVMISNQLGATESTEHKVELNGKVYSWTGFYSV
ETILNPELASTAEQGK
>Mature_735_residues
TKNMTTKPVLLTEAEIEQLHLEVGRSSLMGKTIAANAKDLEAFMCLPIDVPGHGEAGGYEHNRHKQNYTYMNLAGRMFLI
TKEQKYADFVTELLEEYADKYLTFDYHVQKNTNPTGRLFHQILNEHCWLMFSSLAYSCVASTLTQEQRDNIESRIFEPML
EMFTVKYAHDFDRIHNHGIWAVAAVGICGLALGKREYLEMSVYGIDRNDTGGFLAQISQLFAPSGYYMEGPYYHRYAIRP
TCVFAEVIHRHMPEVDIYNYKGGVIGNTVQAMLATAYPNGEFPALNDASRTMGITDMGVQVAVSVYSKHYSSENGVDQNI
LGMAKIQDAVWMHPCGLELSKAYEAASVEKEIGMPFWPSVELNEGPEGHNGAQGFIRMQDKKGDVSQLVMNYGQHGMGHG
NFDTLGISFFNRGQEVLREYGFCRWVNVEPKFGGRYLDENKSYARQTIAHNAVTIDEKCQNNFDVERADSVHGLPHFFKV
EDEKINGMSAFANDHYQGFDMQRSVFMLNLEELESPLLLDLYRLDSTKGGEGEHQYDYSHQYAGQIVRTNFEYQANKELN
TLGSDFGYQHLWNVASGEVKGTALVSWLQNNTYYTWLGATSNDNAEVVFTRTGANDPSFNLRSEPAFILRSKGETTLFAS
VLETHGYFNEEFEQSVNARGVVKDIKVVAHTNAGSVVEITTEKSNVTVMISNQLGATESTEHKVELNGKVYSWTGFYSVE
TILNPELASTAEQGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82869; Mature: 82738

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNMTTKPVLLTEAEIEQLHLEVGRSSLMGKTIAANAKDLEAFMCLPIDVPGHGEAGGY
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCCCC
EHNRHKQNYTYMNLAGRMFLITKEQKYADFVTELLEEYADKYLTFDYHVQKNTNPTGRLF
CCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH
HQILNEHCWLMFSSLAYSCVASTLTQEQRDNIESRIFEPMLEMFTVKYAHDFDRIHNHGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WAVAAVGICGLALGKREYLEMSVYGIDRNDTGGFLAQISQLFAPSGYYMEGPYYHRYAIR
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCCEEEEEECC
PTCVFAEVIHRHMPEVDIYNYKGGVIGNTVQAMLATAYPNGEFPALNDASRTMGITDMGV
HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCH
QVAVSVYSKHYSSENGVDQNILGMAKIQDAVWMHPCGLELSKAYEAASVEKEIGMPFWPS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCC
VELNEGPEGHNGAQGFIRMQDKKGDVSQLVMNYGQHGMGHGNFDTLGISFFNRGQEVLRE
EECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHH
YGFCRWVNVEPKFGGRYLDENKSYARQTIAHNAVTIDEKCQNNFDVERADSVHGLPHFFK
CCCEEEEECCCCCCCEECCCCHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCEEE
VEDEKINGMSAFANDHYQGFDMQRSVFMLNLEELESPLLLDLYRLDSTKGGEGEHQYDYS
ECCCCCCCHHHHCCCCCCCCCCCCEEEEEEHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
HQYAGQIVRTNFEYQANKELNTLGSDFGYQHLWNVASGEVKGTALVSWLQNNTYYTWLGA
HHHCCEEEEECCCEECCCCHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEC
TSNDNAEVVFTRTGANDPSFNLRSEPAFILRSKGETTLFASVLETHGYFNEEFEQSVNAR
CCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHCCCCC
GVVKDIKVVAHTNAGSVVEITTEKSNVTVMISNQLGATESTEHKVELNGKVYSWTGFYSV
CCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCEEEEEECEEEE
ETILNPELASTAEQGK
EECCCCHHHHHHHCCC
>Mature Secondary Structure 
TKNMTTKPVLLTEAEIEQLHLEVGRSSLMGKTIAANAKDLEAFMCLPIDVPGHGEAGGY
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEEEECCCCCCCCCC
EHNRHKQNYTYMNLAGRMFLITKEQKYADFVTELLEEYADKYLTFDYHVQKNTNPTGRLF
CCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH
HQILNEHCWLMFSSLAYSCVASTLTQEQRDNIESRIFEPMLEMFTVKYAHDFDRIHNHGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WAVAAVGICGLALGKREYLEMSVYGIDRNDTGGFLAQISQLFAPSGYYMEGPYYHRYAIR
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCCEEEEEECC
PTCVFAEVIHRHMPEVDIYNYKGGVIGNTVQAMLATAYPNGEFPALNDASRTMGITDMGV
HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCH
QVAVSVYSKHYSSENGVDQNILGMAKIQDAVWMHPCGLELSKAYEAASVEKEIGMPFWPS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCC
VELNEGPEGHNGAQGFIRMQDKKGDVSQLVMNYGQHGMGHGNFDTLGISFFNRGQEVLRE
EECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHH
YGFCRWVNVEPKFGGRYLDENKSYARQTIAHNAVTIDEKCQNNFDVERADSVHGLPHFFK
CCCEEEEECCCCCCCEECCCCHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCEEE
VEDEKINGMSAFANDHYQGFDMQRSVFMLNLEELESPLLLDLYRLDSTKGGEGEHQYDYS
ECCCCCCCHHHHCCCCCCCCCCCCEEEEEEHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
HQYAGQIVRTNFEYQANKELNTLGSDFGYQHLWNVASGEVKGTALVSWLQNNTYYTWLGA
HHHCCEEEEECCCEECCCCHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEC
TSNDNAEVVFTRTGANDPSFNLRSEPAFILRSKGETTLFASVLETHGYFNEEFEQSVNAR
CCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHCCCCC
GVVKDIKVVAHTNAGSVVEITTEKSNVTVMISNQLGATESTEHKVELNGKVYSWTGFYSV
CCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCEEEEEECEEEE
ETILNPELASTAEQGK
EECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA