Click here to switch to the map view.

The map label for this gene is viuD [H]

Identifier: 218709118

GI number: 218709118

Start: 1189154

End: 1190194

Strand: Direct

Name: viuD [H]

Synonym: VS_1124

Alternate gene names: 218709118

Gene position: 1189154-1190194 (Clockwise)

Preceding gene: 218709117

Following gene: 218709119

Centisome position: 36.04

GC content: 46.21

Gene sequence:

>1041_bases
ATGACAAGTATTGCTAGTCCTGCAGAAGCATTTGAACAGATAAGAAATGGACAACGACGACGATGGCTGATAGCGGGAGT
CGTGTTGTTATTTTTTGCCTCGTGTTTTAGCCTTTTTATCGGCACGCATTACATATCGCCGGTAGTGACTTTGGATGCGA
TTTTTTCTTTTGATCCAACCAACAGTGATCATCTATTGGTTGTCCACCTTCGAATTCCACGCACCTTGTTAGCTTTAGTT
GTTGGCGGTGCGCTTGGTGTTGCTGGCGTTATCATGCAAAGCTTAACTCGTAACCCATTAGCAGATCCTGGGATACTCGG
TGTCAATGCGGGGGCTACAGTTGCCATAGTATCAGCGATAGCCTTTCTGGGCATCCATGATATGGCCTATGTGATGTGGT
TTGGTTTGCTTGGGGCGGCTGTTTCCGGAGCGGGTGTTTTTGCCCTTGCTGGGGTAAATAAAGGGGTTAACCCTGTAAGA
ATTGTATTGGCGGGAACTGCTTTGTCGGTTGTGTTGCTTGCACTGACTCATATGATCACAATAAACAGCAATGAAATGGT
GTTTGAACAATATAGACATTGGGCTGTGGGGTCATTTCAAGGGCGAGGTTACGATGTCTTGATCCCGGCTGCCATGTTAA
TAGCCATTGGATTAGTAATCGCATTTTCATTAAGTAAAGCCTTAGATACTGTCTCGTTAGGGGACGATATTGGTCACGCC
TTAGGTGTTAACCCGATCAAAATATGGTGTTTTGCTTCTATTGCTATTGTGGTTTTAGCGGGGACCTCTACTGCGGCGGC
TGGTCCTATCAGCTTTGTTGGTCTTACTGCCCCTCATATTGCAAGGATGGCGGCGGGGCCTGATCATAAATGGTTGATGC
CTTTCTCTTTACTGATTGCATCCATTCTGGCAGTTGTCGCCGATGTACTAGGCCGGATCGTCGGGTATCCCAATGAGATC
AGTGTAGGCATTATGATTGCTCTAATCGGCGGGCCATTCTTTGTATTCTTAGTGAAACGTTGGAAGATATCTCTCCTATG
A

Upstream 100 bases:

>100_bases
TGCTACTGAAATCGTTAACGACATTGTTCAGCTTTTTGAACGAGATACAAATGCAGGTTAATGGCTAATGCCGATGGGAA
ATGGGTAAAGGATGTCCGTG

Downstream 100 bases:

>100_bases
TGATTGAGCCTTACACTCTTCAACATTCTGGCTCGGGAAGTGTTGTACGCTTCGGTCAGTTTTCTTTCTGTTATCAACCG
TCTCATATACTTGTCGCTTT

Product: iron-siderophore uptake ABC transporter transmembrane protein

Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTSIASPAEAFEQIRNGQRRRWLIAGVVLLFFASCFSLFIGTHYISPVVTLDAIFSFDPTNSDHLLVVHLRIPRTLLALV
VGGALGVAGVIMQSLTRNPLADPGILGVNAGATVAIVSAIAFLGIHDMAYVMWFGLLGAAVSGAGVFALAGVNKGVNPVR
IVLAGTALSVVLLALTHMITINSNEMVFEQYRHWAVGSFQGRGYDVLIPAAMLIAIGLVIAFSLSKALDTVSLGDDIGHA
LGVNPIKIWCFASIAIVVLAGTSTAAAGPISFVGLTAPHIARMAAGPDHKWLMPFSLLIASILAVVADVLGRIVGYPNEI
SVGIMIALIGGPFFVFLVKRWKISLL

Sequences:

>Translated_346_residues
MTSIASPAEAFEQIRNGQRRRWLIAGVVLLFFASCFSLFIGTHYISPVVTLDAIFSFDPTNSDHLLVVHLRIPRTLLALV
VGGALGVAGVIMQSLTRNPLADPGILGVNAGATVAIVSAIAFLGIHDMAYVMWFGLLGAAVSGAGVFALAGVNKGVNPVR
IVLAGTALSVVLLALTHMITINSNEMVFEQYRHWAVGSFQGRGYDVLIPAAMLIAIGLVIAFSLSKALDTVSLGDDIGHA
LGVNPIKIWCFASIAIVVLAGTSTAAAGPISFVGLTAPHIARMAAGPDHKWLMPFSLLIASILAVVADVLGRIVGYPNEI
SVGIMIALIGGPFFVFLVKRWKISLL
>Mature_345_residues
TSIASPAEAFEQIRNGQRRRWLIAGVVLLFFASCFSLFIGTHYISPVVTLDAIFSFDPTNSDHLLVVHLRIPRTLLALVV
GGALGVAGVIMQSLTRNPLADPGILGVNAGATVAIVSAIAFLGIHDMAYVMWFGLLGAAVSGAGVFALAGVNKGVNPVRI
VLAGTALSVVLLALTHMITINSNEMVFEQYRHWAVGSFQGRGYDVLIPAAMLIAIGLVIAFSLSKALDTVSLGDDIGHAL
GVNPIKIWCFASIAIVVLAGTSTAAAGPISFVGLTAPHIARMAAGPDHKWLMPFSLLIASILAVVADVLGRIVGYPNEIS
VGIMIALIGGPFFVFLVKRWKISLL

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786805, Length=306, Percent_Identity=42.156862745098, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI1790740, Length=317, Percent_Identity=36.2776025236593, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1790741, Length=326, Percent_Identity=31.2883435582822, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1788004, Length=332, Percent_Identity=32.2289156626506, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786804, Length=281, Percent_Identity=31.6725978647687, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786347, Length=275, Percent_Identity=34.1818181818182, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36374; Mature: 36243

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIASPAEAFEQIRNGQRRRWLIAGVVLLFFASCFSLFIGTHYISPVVTLDAIFSFDPT
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NSDHLLVVHLRIPRTLLALVVGGALGVAGVIMQSLTRNPLADPGILGVNAGATVAIVSAI
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
AFLGIHDMAYVMWFGLLGAAVSGAGVFALAGVNKGVNPVRIVLAGTALSVVLLALTHMIT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHE
INSNEMVFEQYRHWAVGSFQGRGYDVLIPAAMLIAIGLVIAFSLSKALDTVSLGDDIGHA
ECCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LGVNPIKIWCFASIAIVVLAGTSTAAAGPISFVGLTAPHIARMAAGPDHKWLMPFSLLIA
HCCCHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHH
SILAVVADVLGRIVGYPNEISVGIMIALIGGPFFVFLVKRWKISLL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSIASPAEAFEQIRNGQRRRWLIAGVVLLFFASCFSLFIGTHYISPVVTLDAIFSFDPT
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NSDHLLVVHLRIPRTLLALVVGGALGVAGVIMQSLTRNPLADPGILGVNAGATVAIVSAI
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
AFLGIHDMAYVMWFGLLGAAVSGAGVFALAGVNKGVNPVRIVLAGTALSVVLLALTHMIT
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHE
INSNEMVFEQYRHWAVGSFQGRGYDVLIPAAMLIAIGLVIAFSLSKALDTVSLGDDIGHA
ECCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LGVNPIKIWCFASIAIVVLAGTSTAAAGPISFVGLTAPHIARMAAGPDHKWLMPFSLLIA
HCCCHHHHHHHHHHHHHHEECCCCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHH
SILAVVADVLGRIVGYPNEISVGIMIALIGGPFFVFLVKRWKISLL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]

Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]