| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is viuP [H]
Identifier: 218709117
GI number: 218709117
Start: 1188227
End: 1189114
Strand: Direct
Name: viuP [H]
Synonym: VS_1123
Alternate gene names: 218709117
Gene position: 1188227-1189114 (Clockwise)
Preceding gene: 218709116
Following gene: 218709118
Centisome position: 36.01
GC content: 43.58
Gene sequence:
>888_bases ATGACATATCAAAATACTTATCCCAAGACTTTCGTCAATGCGGATGGCTCACAGACAGTGATCCCATCTAAACCGACTCG AATCCTTTCTACCTCGGTGACGATTAGCGGGACGCTACTGGCTATTGATGCTCCTTTAGCCGCAACAGCACTCACTTATG AAGGAAAGTTTTTTAGTCAATGGGCAGATATTGCTGAACAGAGAAGCGTGGAAAAGGCATGGCCTGCCGGCAGCGTTGAT TTAGAGTCTGCCTATATCTATGACCCTGATTTGATTGTTGTAGCATGGCGCGGTGGTGATTCGGCGAGAGATCAAATAGC TGAATTTAAGCAAATAGCACCAACCATTATTTTGGATTACACCGCACAATCATGGCAAGACTTGGCTTTGAGGCTTGGAC AGGCGACAGGGTTAGAAGAACAAGCCCAACAAAAAATTAGCCAGTTTGAGTTGTTCGTTAACCAGAGTAAAAACAAGCTA CAGATACCAGAAGGCGAAACCAATATTGTGGCGTATTTTGGACCTGGAGCAACCAATGCTATCGCATTAGAGGACGGCGT TCATGCCGACTTGCTCATTGACCTCGGTTTCAAAATGGAAGTGCAAAATCGTCAATGGCATGACAACACCGTGCCTTTAT CAGATTTTATGCGAGTCCACTTTGAACTGCTGACTCAACTTAAAGCTGATACAACATTTTTGCTAGAAGCGAGTGATGAT AGCGCTAATCGATTTATGCACGACCCAATCCTGATCAACCTTCCGTCCGTCCGGAATAAACAAGTCTTTGGTTTAGGTGA AAATTCATTTCGTATCGATATGTATAGTGCTACTGAAATCGTTAACGACATTGTTCAGCTTTTTGAACGAGATACAAATG CAGGTTAA
Upstream 100 bases:
>100_bases GTAAATGAGAATCAATGTAATTTTTAAAATCAATATTGTGTTTAAGTTCGTTGTTGTTTTTTTGATTTCAGCTTCGGCTT CTGTTTTCGCAGAAACCGAA
Downstream 100 bases:
>100_bases TGGCTAATGCCGATGGGAAATGGGTAAAGGATGTCCGTGATGACAAGTATTGCTAGTCCTGCAGAAGCATTTGAACAGAT AAGAAATGGACAACGACGAC
Product: iron-enterobactin transporter periplasmic binding protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTYQNTYPKTFVNADGSQTVIPSKPTRILSTSVTISGTLLAIDAPLAATALTYEGKFFSQWADIAEQRSVEKAWPAGSVD LESAYIYDPDLIVVAWRGGDSARDQIAEFKQIAPTIILDYTAQSWQDLALRLGQATGLEEQAQQKISQFELFVNQSKNKL QIPEGETNIVAYFGPGATNAIALEDGVHADLLIDLGFKMEVQNRQWHDNTVPLSDFMRVHFELLTQLKADTTFLLEASDD SANRFMHDPILINLPSVRNKQVFGLGENSFRIDMYSATEIVNDIVQLFERDTNAG
Sequences:
>Translated_295_residues MTYQNTYPKTFVNADGSQTVIPSKPTRILSTSVTISGTLLAIDAPLAATALTYEGKFFSQWADIAEQRSVEKAWPAGSVD LESAYIYDPDLIVVAWRGGDSARDQIAEFKQIAPTIILDYTAQSWQDLALRLGQATGLEEQAQQKISQFELFVNQSKNKL QIPEGETNIVAYFGPGATNAIALEDGVHADLLIDLGFKMEVQNRQWHDNTVPLSDFMRVHFELLTQLKADTTFLLEASDD SANRFMHDPILINLPSVRNKQVFGLGENSFRIDMYSATEIVNDIVQLFERDTNAG >Mature_294_residues TYQNTYPKTFVNADGSQTVIPSKPTRILSTSVTISGTLLAIDAPLAATALTYEGKFFSQWADIAEQRSVEKAWPAGSVDL ESAYIYDPDLIVVAWRGGDSARDQIAEFKQIAPTIILDYTAQSWQDLALRLGQATGLEEQAQQKISQFELFVNQSKNKLQ IPEGETNIVAYFGPGATNAIALEDGVHADLLIDLGFKMEVQNRQWHDNTVPLSDFMRVHFELLTQLKADTTFLLEASDDS ANRFMHDPILINLPSVRNKQVFGLGENSFRIDMYSATEIVNDIVQLFERDTNAG
Specific function: Binds ferrienterobactin; part of the binding-protein- dependent transport system for uptake of ferrienterobactin [H]
COG id: COG4592
COG function: function code P; ABC-type Fe2+-enterobactin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786807, Length=292, Percent_Identity=31.1643835616438, Blast_Score=156, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 32829; Mature: 32698
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYQNTYPKTFVNADGSQTVIPSKPTRILSTSVTISGTLLAIDAPLAATALTYEGKFFSQ CCCCCCCCCEEECCCCCCEECCCCCCEEEEEEEEEEEEEEEEECCCEEEEEEECCHHHHH WADIAEQRSVEKAWPAGSVDLESAYIYDPDLIVVAWRGGDSARDQIAEFKQIAPTIILDY HHHHHHHHCHHHHCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEC TAQSWQDLALRLGQATGLEEQAQQKISQFELFVNQSKNKLQIPEGETNIVAYFGPGATNA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCE IALEDGVHADLLIDLGFKMEVQNRQWHDNTVPLSDFMRVHFELLTQLKADTTFLLEASDD EEECCCCCEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC SANRFMHDPILINLPSVRNKQVFGLGENSFRIDMYSATEIVNDIVQLFERDTNAG CCCCEECCCEEEECCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TYQNTYPKTFVNADGSQTVIPSKPTRILSTSVTISGTLLAIDAPLAATALTYEGKFFSQ CCCCCCCCEEECCCCCCEECCCCCCEEEEEEEEEEEEEEEEECCCEEEEEEECCHHHHH WADIAEQRSVEKAWPAGSVDLESAYIYDPDLIVVAWRGGDSARDQIAEFKQIAPTIILDY HHHHHHHHCHHHHCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEC TAQSWQDLALRLGQATGLEEQAQQKISQFELFVNQSKNKLQIPEGETNIVAYFGPGATNA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCE IALEDGVHADLLIDLGFKMEVQNRQWHDNTVPLSDFMRVHFELLTQLKADTTFLLEASDD EEECCCCCEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC SANRFMHDPILINLPSVRNKQVFGLGENSFRIDMYSATEIVNDIVQLFERDTNAG CCCCEECCCEEEECCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]