Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218708817
Identifier: 218708817
GI number: 218708817
Start: 838842
End: 839147
Strand: Direct
Name: 218708817
Synonym: VS_0817
Alternate gene names: NA
Gene position: 838842-839147 (Clockwise)
Preceding gene: 218708816
Following gene: 218708818
Centisome position: 25.42
GC content: 37.91
Gene sequence:
>306_bases ATGAGCAAACTGCTTCAAGAGCTTTGTGAGCTCGATCAATTAATTATGTCTAAGCTCGAATTTAGTGAAATTAATGCTGA AGAAATCGTGCATCTTGTCGATAACAGAGAACAGTTATTGCAAAACGTGCTTCAATTAATCGATTCATATCCCGACGTTA AGCAAAGCTCCGAGTGGTTTGAAGCCATTTCGAGAACAAGACAATTGGTCGAACTGATGCAGTCTGAGACTGGTCTAGTA GGTAAAAGCTTACATAAATACCGACATGGTGCCAAATCAGTTCAACAATACAAAAAGTTTTTATAG
Upstream 100 bases:
>100_bases CCTGCAGAATCGCACGCACTCCAAGTTCACTGCTATGCAGGATGCGACCAGCAAGATGCAATCTCAGTTAGGCAGCATGA TGAGTGCAATGGGCTAATAG
Downstream 100 bases:
>100_bases AAGAGGTTTACTATGCGCGGTTCTTTACAGGCATATAAAAAGGTATCAGTGGATAGCCAGCTTACAGCTGCCTCACCGCA TAAAATTGTTCAGATGCTAA
Product: polar flagellar rod protein FlaI
Products: NA
Alternate protein names: Flagellar Rod Protein FlaI; FlaI Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSKLLQELCELDQLIMSKLEFSEINAEEIVHLVDNREQLLQNVLQLIDSYPDVKQSSEWFEAISRTRQLVELMQSETGLV GKSLHKYRHGAKSVQQYKKFL
Sequences:
>Translated_101_residues MSKLLQELCELDQLIMSKLEFSEINAEEIVHLVDNREQLLQNVLQLIDSYPDVKQSSEWFEAISRTRQLVELMQSETGLV GKSLHKYRHGAKSVQQYKKFL >Mature_100_residues SKLLQELCELDQLIMSKLEFSEINAEEIVHLVDNREQLLQNVLQLIDSYPDVKQSSEWFEAISRTRQLVELMQSETGLVG KSLHKYRHGAKSVQQYKKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11823; Mature: 11692
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLQELCELDQLIMSKLEFSEINAEEIVHLVDNREQLLQNVLQLIDSYPDVKQSSEWF CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH EAISRTRQLVELMQSETGLVGKSLHKYRHGAKSVQQYKKFL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLLQELCELDQLIMSKLEFSEINAEEIVHLVDNREQLLQNVLQLIDSYPDVKQSSEWF HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH EAISRTRQLVELMQSETGLVGKSLHKYRHGAKSVQQYKKFL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA