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The map label for this gene is fliS [H]

Identifier: 218708818

GI number: 218708818

Start: 839160

End: 839570

Strand: Direct

Name: fliS [H]

Synonym: VS_0818

Alternate gene names: 218708818

Gene position: 839160-839570 (Clockwise)

Preceding gene: 218708817

Following gene: 218708819

Centisome position: 25.43

GC content: 42.58

Gene sequence:

>411_bases
ATGCGCGGTTCTTTACAGGCATATAAAAAGGTATCAGTGGATAGCCAGCTTACAGCTGCCTCACCGCATAAAATTGTTCA
GATGCTAATGGCTGGTGCTATCGAGCGCTTAATTCAAGGTAAAGCGGCAATGCAAGCGGGCAACATCCCGGTGAAAGGTG
AGCGACTGAGTAAGGCTCTAGATATCATTATTAGCCTGCGTAGTTGCCTATCAATGTCCGATGGTGGCGACATTGCGAAA
AATCTAGATCAACTTTATGAGTTTATGATCACGCAAATTTCTGCTGCAAATCACAAAAATGATCCTCAGCCAATTGATGA
TGTTATCGATATTATCCGCGAAATTAAGAGCGCTTGGGACCAAATTCCGAATGAATATCACAATTTAACGTCTGCGGATG
TTGGTATTTAA

Upstream 100 bases:

>100_bases
GCAGTCTGAGACTGGTCTAGTAGGTAAAAGCTTACATAAATACCGACATGGTGCCAAATCAGTTCAACAATACAAAAAGT
TTTTATAGAAGAGGTTTACT

Downstream 100 bases:

>100_bases
AGAAACATCCCAGTTTAAACCAATCGCATATCTCTGAATTGCTTGGTTGCCTTATTTTTATAATCAAATAAAATAGAAGC
CATTAGATAGCCTAATGGCT

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRGSLQAYKKVSVDSQLTAASPHKIVQMLMAGAIERLIQGKAAMQAGNIPVKGERLSKALDIIISLRSCLSMSDGGDIAK
NLDQLYEFMITQISAANHKNDPQPIDDVIDIIREIKSAWDQIPNEYHNLTSADVGI

Sequences:

>Translated_136_residues
MRGSLQAYKKVSVDSQLTAASPHKIVQMLMAGAIERLIQGKAAMQAGNIPVKGERLSKALDIIISLRSCLSMSDGGDIAK
NLDQLYEFMITQISAANHKNDPQPIDDVIDIIREIKSAWDQIPNEYHNLTSADVGI
>Mature_136_residues
MRGSLQAYKKVSVDSQLTAASPHKIVQMLMAGAIERLIQGKAAMQAGNIPVKGERLSKALDIIISLRSCLSMSDGGDIAK
NLDQLYEFMITQISAANHKNDPQPIDDVIDIIREIKSAWDQIPNEYHNLTSADVGI

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=117, Percent_Identity=34.1880341880342, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14875; Mature: 14875

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSLQAYKKVSVDSQLTAASPHKIVQMLMAGAIERLIQGKAAMQAGNIPVKGERLSKAL
CCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DIIISLRSCLSMSDGGDIAKNLDQLYEFMITQISAANHKNDPQPIDDVIDIIREIKSAWD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QIPNEYHNLTSADVGI
HCCHHHHCCCHHHCCC
>Mature Secondary Structure
MRGSLQAYKKVSVDSQLTAASPHKIVQMLMAGAIERLIQGKAAMQAGNIPVKGERLSKAL
CCCHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DIIISLRSCLSMSDGGDIAKNLDQLYEFMITQISAANHKNDPQPIDDVIDIIREIKSAWD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QIPNEYHNLTSADVGI
HCCHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]