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The map label for this gene is fliD [H]

Identifier: 218708816

GI number: 218708816

Start: 836784

End: 838838

Strand: Direct

Name: fliD [H]

Synonym: VS_0816

Alternate gene names: 218708816

Gene position: 836784-838838 (Clockwise)

Preceding gene: 218708815

Following gene: 218708817

Centisome position: 25.36

GC content: 45.45

Gene sequence:

>2055_bases
ATGAGTTTTGGCCCAATGGGGATTTCGTCTGGCATGGATATCAATTCCATGGTCAGCAAAATTGTTGATTCGGAGCGTGT
GCCTAAACAGCAACAAATCAACAATGAACGAACGCGAATCGACACCAGCATTAGTGCCTATGGAAGACTCAGAGAGTCCC
TTGATTCGATGAAAAATCTGATGACAAGCTTTCGCCAGGACAAAGCTTTCGCTGTGCGAACAGTAGAAAGCTCTGATGAA
GGTCTTGTCTCTGCAACCGCGACTACCGAAGCGATCGCTGGCAAATATGCCATCGATGTGTTGCAGCTTGCCCAGAGCCA
TAAAGTGGCTTCTGATGTACTATCAGAGGACATGAAATTTGGCCCAGGTAAGCTGCAGGTTTCGCTTGGTAAAGAGAGCT
TCGAGACACAAGTTAGTGCTAACTCAAAACTGCGTGATGTTGTTAGAGCAATTAACAGTGCCGGGGATAATCCGGGTGTT
CGAGCTTCTATTATTAACGATAAAGAAGGACCACGGTTAGTCCTCGCTTCAAATATGTCTGGTGAAGACAATCAAATAAA
ACTCCACGTTGACTCTGAAGATAACAACCCTCTAAAAAAATTAGAATATAAAACCCTATCGGAAAGACTGAAAGCCTTAG
AAGATGCTCGCTCAGTAGCGCAAGGCGTCTTGGCTGATGCCCCTCCCAAATTGGATGCCGACGGTAACCCTATTCCAGAC
GGCTTCGCTGTTCCTCTGCGAGACGCTAACGGAAACACTATATTTGATGTAAACGGTAATCCTATTTATGAAAGAAAACC
GGAACCCGTCGTTGAACCCGAAGATCCTTTCGCTGAATTTGACCGTGACAATTTAACTTATGGTCAAGCTGCGGCAATGG
CTGGTCAGAAGGCGCTAGATGCGGCAGCTTTAGCGGCTTCAGGGATGCCAGAAGATACAATCCCTGGGTGGAACAATACC
GCTTCAGGTACATTACTCGATTCTTTTTTTAGACCAGAACTTGAGCTTGACGAAAAAGCCATAGAGAAAGCAGTTGATAT
TCCTGGGTGGTCAAATACTGCCGCTGGTACGTTGACGGATTCTTATGTTACTCCCAAAGAGGCACAGCAGAAACTCGATG
CCGAGAAAGCCAGAATAGAAAGTAAATTGGTTGATGAACGTTCTGAGTTAGCGAAGAGAGTTGAAAGGGGTGAACTAACC
CCACTGCAGGCTCAGCAATTAGAGAGAGCTAAATTATCTCCAGCAGAACGAGCACACTTAGAGAAAGTTGATAAAGCTCA
AGCTGACCTTGCGGTAGCTCAACAGTCTTTTGACCAATACAGCGGTATGACTGAAGTGCAAGCAGGACAAAATTCTATGG
TTGTTCTAGACGGCATTGCTCAGCTCTCTAGCAATAACAATGTGATTGAAGATGCCGTTGAAGGTATTGATATTACGGTT
AAAGGTAAAACCCCTAAAGATAAGCCGCCAGCAGAGATTGGTGTTGAGTACGACCGTAATCGTGTTCGTGAAGATATTGA
AGCTTTTGTTAACTCTTATAATCAGTTTTACCAAGTATCTAAAGATTTAGCGGGCGTCGATCCACTGACTGGTCAAAAAG
GCCCTCTTTCTGGCGACAGTACAGTACGTAGTGCCGATTCGCGATTGAAAGGTGTGTTCTCATCAAGCATTGAAGACGCG
CCAGACAATCTAAAGTCTTTGACTGAATTTGGCATCACCACCACAAGACAAGGCTCGCTAGAAATCAATTACGATATGCT
TGACCGTCAACTCAACAATCACTTTGATAAGTTGGGTGAATTCTTTGGTGGTAACAATGGCTTCGCTAAAAAAGTCGAAG
ATGCGATTCAAGGGATCACGGGTGTTACCGGTTCTATCCGTACGAGAGAGAAGAGCTTGGTCGAACAAAACTATCGGTTG
GTTGATGACCAAGTCGCGCTCGATCGCCGTATGGATAGCCTGCAGAATCGCACGCACTCCAAGTTCACTGCTATGCAGGA
TGCGACCAGCAAGATGCAATCTCAGTTAGGCAGCATGATGAGTGCAATGGGCTAA

Upstream 100 bases:

>100_bases
GATGAAGAAATGCTCGAAATTCTAAGGCGCCTAGCAGCCCAAACCTCGAATAGTGGAATATTGGAGGCTAAGGTTTAAGT
CGTATTATTGAGGTGGTTTA

Downstream 100 bases:

>100_bases
TAGATGAGCAAACTGCTTCAAGAGCTTTGTGAGCTCGATCAATTAATTATGTCTAAGCTCGAATTTAGTGAAATTAATGC
TGAAGAAATCGTGCATCTTG

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MSFGPMGISSGMDINSMVSKIVDSERVPKQQQINNERTRIDTSISAYGRLRESLDSMKNLMTSFRQDKAFAVRTVESSDE
GLVSATATTEAIAGKYAIDVLQLAQSHKVASDVLSEDMKFGPGKLQVSLGKESFETQVSANSKLRDVVRAINSAGDNPGV
RASIINDKEGPRLVLASNMSGEDNQIKLHVDSEDNNPLKKLEYKTLSERLKALEDARSVAQGVLADAPPKLDADGNPIPD
GFAVPLRDANGNTIFDVNGNPIYERKPEPVVEPEDPFAEFDRDNLTYGQAAAMAGQKALDAAALAASGMPEDTIPGWNNT
ASGTLLDSFFRPELELDEKAIEKAVDIPGWSNTAAGTLTDSYVTPKEAQQKLDAEKARIESKLVDERSELAKRVERGELT
PLQAQQLERAKLSPAERAHLEKVDKAQADLAVAQQSFDQYSGMTEVQAGQNSMVVLDGIAQLSSNNNVIEDAVEGIDITV
KGKTPKDKPPAEIGVEYDRNRVREDIEAFVNSYNQFYQVSKDLAGVDPLTGQKGPLSGDSTVRSADSRLKGVFSSSIEDA
PDNLKSLTEFGITTTRQGSLEINYDMLDRQLNNHFDKLGEFFGGNNGFAKKVEDAIQGITGVTGSIRTREKSLVEQNYRL
VDDQVALDRRMDSLQNRTHSKFTAMQDATSKMQSQLGSMMSAMG

Sequences:

>Translated_684_residues
MSFGPMGISSGMDINSMVSKIVDSERVPKQQQINNERTRIDTSISAYGRLRESLDSMKNLMTSFRQDKAFAVRTVESSDE
GLVSATATTEAIAGKYAIDVLQLAQSHKVASDVLSEDMKFGPGKLQVSLGKESFETQVSANSKLRDVVRAINSAGDNPGV
RASIINDKEGPRLVLASNMSGEDNQIKLHVDSEDNNPLKKLEYKTLSERLKALEDARSVAQGVLADAPPKLDADGNPIPD
GFAVPLRDANGNTIFDVNGNPIYERKPEPVVEPEDPFAEFDRDNLTYGQAAAMAGQKALDAAALAASGMPEDTIPGWNNT
ASGTLLDSFFRPELELDEKAIEKAVDIPGWSNTAAGTLTDSYVTPKEAQQKLDAEKARIESKLVDERSELAKRVERGELT
PLQAQQLERAKLSPAERAHLEKVDKAQADLAVAQQSFDQYSGMTEVQAGQNSMVVLDGIAQLSSNNNVIEDAVEGIDITV
KGKTPKDKPPAEIGVEYDRNRVREDIEAFVNSYNQFYQVSKDLAGVDPLTGQKGPLSGDSTVRSADSRLKGVFSSSIEDA
PDNLKSLTEFGITTTRQGSLEINYDMLDRQLNNHFDKLGEFFGGNNGFAKKVEDAIQGITGVTGSIRTREKSLVEQNYRL
VDDQVALDRRMDSLQNRTHSKFTAMQDATSKMQSQLGSMMSAMG
>Mature_683_residues
SFGPMGISSGMDINSMVSKIVDSERVPKQQQINNERTRIDTSISAYGRLRESLDSMKNLMTSFRQDKAFAVRTVESSDEG
LVSATATTEAIAGKYAIDVLQLAQSHKVASDVLSEDMKFGPGKLQVSLGKESFETQVSANSKLRDVVRAINSAGDNPGVR
ASIINDKEGPRLVLASNMSGEDNQIKLHVDSEDNNPLKKLEYKTLSERLKALEDARSVAQGVLADAPPKLDADGNPIPDG
FAVPLRDANGNTIFDVNGNPIYERKPEPVVEPEDPFAEFDRDNLTYGQAAAMAGQKALDAAALAASGMPEDTIPGWNNTA
SGTLLDSFFRPELELDEKAIEKAVDIPGWSNTAAGTLTDSYVTPKEAQQKLDAEKARIESKLVDERSELAKRVERGELTP
LQAQQLERAKLSPAERAHLEKVDKAQADLAVAQQSFDQYSGMTEVQAGQNSMVVLDGIAQLSSNNNVIEDAVEGIDITVK
GKTPKDKPPAEIGVEYDRNRVREDIEAFVNSYNQFYQVSKDLAGVDPLTGQKGPLSGDSTVRSADSRLKGVFSSSIEDAP
DNLKSLTEFGITTTRQGSLEINYDMLDRQLNNHFDKLGEFFGGNNGFAKKVEDAIQGITGVTGSIRTREKSLVEQNYRLV
DDQVALDRRMDSLQNRTHSKFTAMQDATSKMQSQLGSMMSAMG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=250, Percent_Identity=25.6, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 74489; Mature: 74358

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFGPMGISSGMDINSMVSKIVDSERVPKQQQINNERTRIDTSISAYGRLRESLDSMKNL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MTSFRQDKAFAVRTVESSDEGLVSATATTEAIAGKYAIDVLQLAQSHKVASDVLSEDMKF
HHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPGKLQVSLGKESFETQVSANSKLRDVVRAINSAGDNPGVRASIINDKEGPRLVLASNMS
CCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCC
GEDNQIKLHVDSEDNNPLKKLEYKTLSERLKALEDARSVAQGVLADAPPKLDADGNPIPD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GFAVPLRDANGNTIFDVNGNPIYERKPEPVVEPEDPFAEFDRDNLTYGQAAAMAGQKALD
CCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
AAALAASGMPEDTIPGWNNTASGTLLDSFFRPELELDEKAIEKAVDIPGWSNTAAGTLTD
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
SYVTPKEAQQKLDAEKARIESKLVDERSELAKRVERGELTPLQAQQLERAKLSPAERAHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
EKVDKAQADLAVAQQSFDQYSGMTEVQAGQNSMVVLDGIAQLSSNNNVIEDAVEGIDITV
HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHHHCCCCCHHHHHHCCCEEEE
KGKTPKDKPPAEIGVEYDRNRVREDIEAFVNSYNQFYQVSKDLAGVDPLTGQKGPLSGDS
ECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
TVRSADSRLKGVFSSSIEDAPDNLKSLTEFGITTTRQGSLEINYDMLDRQLNNHFDKLGE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHH
FFGGNNGFAKKVEDAIQGITGVTGSIRTREKSLVEQNYRLVDDQVALDRRMDSLQNRTHS
HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFTAMQDATSKMQSQLGSMMSAMG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFGPMGISSGMDINSMVSKIVDSERVPKQQQINNERTRIDTSISAYGRLRESLDSMKNL
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MTSFRQDKAFAVRTVESSDEGLVSATATTEAIAGKYAIDVLQLAQSHKVASDVLSEDMKF
HHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPGKLQVSLGKESFETQVSANSKLRDVVRAINSAGDNPGVRASIINDKEGPRLVLASNMS
CCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCC
GEDNQIKLHVDSEDNNPLKKLEYKTLSERLKALEDARSVAQGVLADAPPKLDADGNPIPD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GFAVPLRDANGNTIFDVNGNPIYERKPEPVVEPEDPFAEFDRDNLTYGQAAAMAGQKALD
CCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH
AAALAASGMPEDTIPGWNNTASGTLLDSFFRPELELDEKAIEKAVDIPGWSNTAAGTLTD
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
SYVTPKEAQQKLDAEKARIESKLVDERSELAKRVERGELTPLQAQQLERAKLSPAERAHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHH
EKVDKAQADLAVAQQSFDQYSGMTEVQAGQNSMVVLDGIAQLSSNNNVIEDAVEGIDITV
HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHHHCCCCCHHHHHHCCCEEEE
KGKTPKDKPPAEIGVEYDRNRVREDIEAFVNSYNQFYQVSKDLAGVDPLTGQKGPLSGDS
ECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
TVRSADSRLKGVFSSSIEDAPDNLKSLTEFGITTTRQGSLEINYDMLDRQLNNHFDKLGE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHH
FFGGNNGFAKKVEDAIQGITGVTGSIRTREKSLVEQNYRLVDDQVALDRRMDSLQNRTHS
HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFTAMQDATSKMQSQLGSMMSAMG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]