Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is flgI
Identifier: 218708808
GI number: 218708808
Start: 825825
End: 826916
Strand: Direct
Name: flgI
Synonym: VS_0808
Alternate gene names: 218708808
Gene position: 825825-826916 (Clockwise)
Preceding gene: 218708807
Following gene: 218708809
Centisome position: 25.03
GC content: 47.07
Gene sequence:
>1092_bases ATGAAAAAACTGACACTCGTACTCTTCGGCATGCTATTTCTTGCCTCCAGTGCTCATGCCGCGCGTATAAAAGACGTGGC AAAAGTAGCGGGTGTTCGTAGTAACCAACTTGTCGGTTATGGTTTGGTGACGGGTTTGCCGGGCACCGGTGAGACAACTC CCTTTACCGATCAAACGTTTAACGCAATGCTGCAAAATTTTGGCATTCAATTGCCGCCTGGCACCAAGCCAAAAACCAAA AACGTTGCGGCGGTAATCGTTACCGCTGAACTTCCGGCATTCTCCAAGCAAGGTCAGGAAGTAGACGTAACGGTGTCGTC TATTGGTTCAGCAAAAAGCCTTCGTGGTGGTACTTTGCTGCAGACTTTTCTTAAAGGTCTAGACGGTCAAGTGTACGCTG TGGCACAAGGTAATTTGGTTGTGAGTGGTTTTAGTGCTCAAGGCAACGATGGTTCTAAGCTCGTTGGTAACAACCCAAAC GTCGGTATCATCTCTAGCGGTGCGACGGTAGAGCAAGAAATCCCAACCCCATTTGGTCGTGGTGACTACATCACTTTCAA CTTAATCCAATCTGATTTTACTACGGCTCAGCGTTTAGCTGATGCGGTTAATAATTTCCTTGGCCCTCAAATGGCGTCTG CGGTAGATGCGACTTCTGTAAAAGTTCGTGCGCCACGTGAAATCAGCCAACGTGTGGCTTTCTTGTCTGCCATCGAAAAC ATCGAATTTGACCCTGCAGAGGGCTCTGCAAAAATCATTGTTAACTCTCGTACCGGTACTATTGTTGTTGGTAAGCATGT GCGCTTAAAAGCAGCAGCAGTAACACACGGTGGCATGACAGTCGCAATCAAAGAAAATCTAAACGTAAGTCAACCTAACG CATTCTCTGGTGGTCAAACGGTAGTCGTTCCTGATTCGGACATCGAAGTAACCGAAGCCGATGGTAAAATGTTCAAGTTC GAACCCGGTTTAACGCTCGATGATTTGGTACGCGCTGTTAATGAAGTCGGCGCCGCACCTTCTGATTTAATGGCAATCCT TCAAGCCCTGAAACAAGCGGGTGCAATTGAAGGTCAGTTGATCATTATTTAA
Upstream 100 bases:
>100_bases TTTGTAGAGCTTGAGACTGTGTCGATATACTGACACTTTCAGAATTATCTAATTTCAAGCTAACTCATTATAAATTAAAG CAATACAGACAGGTTACTCA
Downstream 100 bases:
>100_bases GGGATAAAGCATGATTAAAAATAACAATGACATCGGCTTTATTCACGATATTGGTAGCCTAGACCGTCTTCGTCAACAAG CGGTAAGCGGTGAAGAAGGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKKLTLVLFGMLFLASSAHAARIKDVAKVAGVRSNQLVGYGLVTGLPGTGETTPFTDQTFNAMLQNFGIQLPPGTKPKTK NVAAVIVTAELPAFSKQGQEVDVTVSSIGSAKSLRGGTLLQTFLKGLDGQVYAVAQGNLVVSGFSAQGNDGSKLVGNNPN VGIISSGATVEQEIPTPFGRGDYITFNLIQSDFTTAQRLADAVNNFLGPQMASAVDATSVKVRAPREISQRVAFLSAIEN IEFDPAEGSAKIIVNSRTGTIVVGKHVRLKAAAVTHGGMTVAIKENLNVSQPNAFSGGQTVVVPDSDIEVTEADGKMFKF EPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII
Sequences:
>Translated_363_residues MKKLTLVLFGMLFLASSAHAARIKDVAKVAGVRSNQLVGYGLVTGLPGTGETTPFTDQTFNAMLQNFGIQLPPGTKPKTK NVAAVIVTAELPAFSKQGQEVDVTVSSIGSAKSLRGGTLLQTFLKGLDGQVYAVAQGNLVVSGFSAQGNDGSKLVGNNPN VGIISSGATVEQEIPTPFGRGDYITFNLIQSDFTTAQRLADAVNNFLGPQMASAVDATSVKVRAPREISQRVAFLSAIEN IEFDPAEGSAKIIVNSRTGTIVVGKHVRLKAAAVTHGGMTVAIKENLNVSQPNAFSGGQTVVVPDSDIEVTEADGKMFKF EPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII >Mature_363_residues MKKLTLVLFGMLFLASSAHAARIKDVAKVAGVRSNQLVGYGLVTGLPGTGETTPFTDQTFNAMLQNFGIQLPPGTKPKTK NVAAVIVTAELPAFSKQGQEVDVTVSSIGSAKSLRGGTLLQTFLKGLDGQVYAVAQGNLVVSGFSAQGNDGSKLVGNNPN VGIISSGATVEQEIPTPFGRGDYITFNLIQSDFTTAQRLADAVNNFLGPQMASAVDATSVKVRAPREISQRVAFLSAIEN IEFDPAEGSAKIIVNSRTGTIVVGKHVRLKAAAVTHGGMTVAIKENLNVSQPNAFSGGQTVVVPDSDIEVTEADGKMFKF EPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQLIII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=357, Percent_Identity=45.9383753501401, Blast_Score=300, Evalue=1e-82,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_VIBSL (B7VKM6)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002416429.1 - GeneID: 7160406 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0808 - HOGENOM: HBG321070 - OMA: NRSDFTT - ProtClustDB: PRK05303 - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 37879; Mature: 37879
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTLVLFGMLFLASSAHAARIKDVAKVAGVRSNQLVGYGLVTGLPGTGETTPFTDQTF CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHH NAMLQNFGIQLPPGTKPKTKNVAAVIVTAELPAFSKQGQEVDVTVSSIGSAKSLRGGTLL HHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCCHHH QTFLKGLDGQVYAVAQGNLVVSGFSAQGNDGSKLVGNNPNVGIISSGATVEQEIPTPFGR HHHHHCCCCEEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEEECCCEEHHHCCCCCCC GDYITFNLIQSDFTTAQRLADAVNNFLGPQMASAVDATSVKVRAPREISQRVAFLSAIEN CCEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC IEFDPAEGSAKIIVNSRTGTIVVGKHVRLKAAAVTHGGMTVAIKENLNVSQPNAFSGGQT CCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCE VVVPDSDIEVTEADGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQL EEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE III EEC >Mature Secondary Structure MKKLTLVLFGMLFLASSAHAARIKDVAKVAGVRSNQLVGYGLVTGLPGTGETTPFTDQTF CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHH NAMLQNFGIQLPPGTKPKTKNVAAVIVTAELPAFSKQGQEVDVTVSSIGSAKSLRGGTLL HHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCCHHH QTFLKGLDGQVYAVAQGNLVVSGFSAQGNDGSKLVGNNPNVGIISSGATVEQEIPTPFGR HHHHHCCCCEEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEEECCCEEHHHCCCCCCC GDYITFNLIQSDFTTAQRLADAVNNFLGPQMASAVDATSVKVRAPREISQRVAFLSAIEN CCEEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC IEFDPAEGSAKIIVNSRTGTIVVGKHVRLKAAAVTHGGMTVAIKENLNVSQPNAFSGGQT CCCCCCCCCEEEEEECCCCEEEECCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCE VVVPDSDIEVTEADGKMFKFEPGLTLDDLVRAVNEVGAAPSDLMAILQALKQAGAIEGQL EEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE III EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA