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The map label for this gene is flgH

Identifier: 218708807

GI number: 218708807

Start: 824955

End: 825731

Strand: Direct

Name: flgH

Synonym: VS_0807

Alternate gene names: 218708807

Gene position: 824955-825731 (Clockwise)

Preceding gene: 218708806

Following gene: 218708808

Centisome position: 25.0

GC content: 44.27

Gene sequence:

>777_bases
ATGAAACGTATTGTTTGTTTAGCTCTGTTTTTATCTATGACGGGCTGTACCACACTGGAGCCAATTGAAACTCCGGCGCA
AGAGAACGCAACGACTGTGGTTGATGCTGTAGAAGGCGACAAGGCTGCCCAGGAAAGCTCTGGCATTATCGACACACTTC
GAGATAGAACTGACCCTATTGCAGGTGATCCTGCATGGGCGCCAATTAACCCGAAGAAAAAACAAGAGCATTATGCGGCA
GCAACAGGCTCACTGTTCAATGCTAACCACATTGGTAGCATGTATGACGACTCAAAACCTCGCGGTATTGGTGACATTAT
TACAGTTGCGTTAGATGAGAATACGCGAGCGACTAAAAAAGCTAATGCAGATATGTCTAAATCGAACGATGCATCGATGG
AACCGTTAGCTGTAGGTGGTGAAAATCTAGAACTTGGTAAATACAATTTTTCTTACGATCTGAGTAACACCAACACCTTT
GCTGGAGATGCATCAGCTAACCAAAGTAACAGCATTAGCGGTTACATTACCGTTGAAGTTATTGAAGTATTAGCTAATGG
CAACCTAGTGGTTCGCGGTGAAAAGTGGATGACGTTGAATACGGGTGATGAGTACATTCGCTTAAGTGGCACCATCCGCC
CTGATGATATCGACTTTGAGAATACCATTGCTTCGAACCGTGTTTCGAATGCACGAATTCAGTACTCAGGTACGGGTGTG
CAGAAAGATATGCAAGAACCTGGGTTCTTGGCACGATTCTTTAATGTATCTTTGTAG

Upstream 100 bases:

>100_bases
GATGAGCTTCGTTAACCAACAACTGTAGCTGGTTAACGAAGCTGTTTACTTATTTCTTTTAATCGTTCTGTTTACTATTG
TCTGCTGAGGGTACATCGCC

Downstream 100 bases:

>100_bases
AGCTTGAGACTGTGTCGATATACTGACACTTTCAGAATTATCTAATTTCAAGCTAACTCATTATAAATTAAAGCAATACA
GACAGGTTACTCAATGAAAA

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKRIVCLALFLSMTGCTTLEPIETPAQENATTVVDAVEGDKAAQESSGIIDTLRDRTDPIAGDPAWAPINPKKKQEHYAA
ATGSLFNANHIGSMYDDSKPRGIGDIITVALDENTRATKKANADMSKSNDASMEPLAVGGENLELGKYNFSYDLSNTNTF
AGDASANQSNSISGYITVEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFENTIASNRVSNARIQYSGTGV
QKDMQEPGFLARFFNVSL

Sequences:

>Translated_258_residues
MKRIVCLALFLSMTGCTTLEPIETPAQENATTVVDAVEGDKAAQESSGIIDTLRDRTDPIAGDPAWAPINPKKKQEHYAA
ATGSLFNANHIGSMYDDSKPRGIGDIITVALDENTRATKKANADMSKSNDASMEPLAVGGENLELGKYNFSYDLSNTNTF
AGDASANQSNSISGYITVEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFENTIASNRVSNARIQYSGTGV
QKDMQEPGFLARFFNVSL
>Mature_258_residues
MKRIVCLALFLSMTGCTTLEPIETPAQENATTVVDAVEGDKAAQESSGIIDTLRDRTDPIAGDPAWAPINPKKKQEHYAA
ATGSLFNANHIGSMYDDSKPRGIGDIITVALDENTRATKKANADMSKSNDASMEPLAVGGENLELGKYNFSYDLSNTNTF
AGDASANQSNSISGYITVEVIEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFENTIASNRVSNARIQYSGTGV
QKDMQEPGFLARFFNVSL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=207, Percent_Identity=36.231884057971, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_VIBSL (B7VKM5)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416428.1
- GeneID:   7160405
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0807
- HOGENOM:   HBG507455
- OMA:   DPIYAGG
- ProtClustDB:   PRK00249
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 27869; Mature: 27869

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVCLALFLSMTGCTTLEPIETPAQENATTVVDAVEGDKAAQESSGIIDTLRDRTDPI
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCHHHHHHHCCCCC
AGDPAWAPINPKKKQEHYAAATGSLFNANHIGSMYDDSKPRGIGDIITVALDENTRATKK
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHH
ANADMSKSNDASMEPLAVGGENLELGKYNFSYDLSNTNTFAGDASANQSNSISGYITVEV
CCCCCCCCCCCCCCCEEECCCCEEECEEEEEEECCCCCEECCCCCCCCCCCCEEEEHHEE
IEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFENTIASNRVSNARIQYSGTGV
HHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCC
QKDMQEPGFLARFFNVSL
HHHHCCCCCEEHEEECCC
>Mature Secondary Structure
MKRIVCLALFLSMTGCTTLEPIETPAQENATTVVDAVEGDKAAQESSGIIDTLRDRTDPI
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCHHHHHHHCCCCC
AGDPAWAPINPKKKQEHYAAATGSLFNANHIGSMYDDSKPRGIGDIITVALDENTRATKK
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHH
ANADMSKSNDASMEPLAVGGENLELGKYNFSYDLSNTNTFAGDASANQSNSISGYITVEV
CCCCCCCCCCCCCCCEEECCCCEEECEEEEEEECCCCCEECCCCCCCCCCCCEEEEHHEE
IEVLANGNLVVRGEKWMTLNTGDEYIRLSGTIRPDDIDFENTIASNRVSNARIQYSGTGV
HHHHHCCCEEEECCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCC
QKDMQEPGFLARFFNVSL
HHHHCCCCCEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA