| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708776
Identifier: 218708776
GI number: 218708776
Start: 797870
End: 798493
Strand: Reverse
Name: 218708776
Synonym: VS_0774
Alternate gene names: NA
Gene position: 798493-797870 (Counterclockwise)
Preceding gene: 218708777
Following gene: 218708775
Centisome position: 24.2
GC content: 47.28
Gene sequence:
>624_bases ATGAACAAAACAATCAAGATAGCGCTCGCCGTTGGATTGGGCTTACTACTCAGCGCTTGTTCGATGGTGTCTCAACAGCC TACAGGCGCAAGTGTCGCAATCGACAAAGACACAGAGCTCGCCTTGCCGCTGCCTGCTGAACTGGGATACTCATTTACGG CGAGCCAGCTGATCAGCGCAACATGGCAAGACGATACGCAGCAACTGCCTGTTCAAGTCGAAGTCACACCAGATAAAGTC GTGTTAGCGGGTTTTTCCTCTTGGGGAACGCGCATCTTATCGCTGCAATACCAAAACCAAACGATTGATACTCAAGTTCT ATCTGGTCTTGGCGCTACCCTGCCGCTACCCGAGCAAGTACTATTTAATTTGATGCTGACTCTATGGCCAGTTGAAGCAT GGGCTCAACCTTTACAAGACATCGGTTGGTATTTGGTCGATACCGAAAACAGCCGCACCGTATTTGATGAAAACCAACAG CCAATCATTAAAATTGATTACCAAGCAGAGCCCGGAATACACAAAACCGCAGGCAACATTGTTTTCAAGCATTTGATTCA AGGCTACACCATCACGATACAAACGTTGAACTCAACGATTGTCGATAACCCAAGTAAGAGCTAA
Upstream 100 bases:
>100_bases TTACCGTCCTAACTGGTATTTTCGTCGCGTGGTTGCTTTCTCCACTTGCAATCAACCACGAACAAGCAGCGGAAAAATCA AACTCTCGAGAGGCTTTTAG
Downstream 100 bases:
>100_bases ACATCATGCCTATTTATATCCAAGACTGTGGTTTCCACTCCGCATTAGGCTCAAGCGTTGCTGACATTCATGGCTGCCTC AAAGGCGAGCATGAATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phospho-N-Acetylmuramoyl-Pentapeptide-Transferase
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNKTIKIALAVGLGLLLSACSMVSQQPTGASVAIDKDTELALPLPAELGYSFTASQLISATWQDDTQQLPVQVEVTPDKV VLAGFSSWGTRILSLQYQNQTIDTQVLSGLGATLPLPEQVLFNLMLTLWPVEAWAQPLQDIGWYLVDTENSRTVFDENQQ PIIKIDYQAEPGIHKTAGNIVFKHLIQGYTITIQTLNSTIVDNPSKS
Sequences:
>Translated_207_residues MNKTIKIALAVGLGLLLSACSMVSQQPTGASVAIDKDTELALPLPAELGYSFTASQLISATWQDDTQQLPVQVEVTPDKV VLAGFSSWGTRILSLQYQNQTIDTQVLSGLGATLPLPEQVLFNLMLTLWPVEAWAQPLQDIGWYLVDTENSRTVFDENQQ PIIKIDYQAEPGIHKTAGNIVFKHLIQGYTITIQTLNSTIVDNPSKS >Mature_207_residues MNKTIKIALAVGLGLLLSACSMVSQQPTGASVAIDKDTELALPLPAELGYSFTASQLISATWQDDTQQLPVQVEVTPDKV VLAGFSSWGTRILSLQYQNQTIDTQVLSGLGATLPLPEQVLFNLMLTLWPVEAWAQPLQDIGWYLVDTENSRTVFDENQQ PIIKIDYQAEPGIHKTAGNIVFKHLIQGYTITIQTLNSTIVDNPSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22639; Mature: 22639
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTIKIALAVGLGLLLSACSMVSQQPTGASVAIDKDTELALPLPAELGYSFTASQLISA CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCHHHHCCCCCHHHHHHH TWQDDTQQLPVQVEVTPDKVVLAGFSSWGTRILSLQYQNQTIDTQVLSGLGATLPLPEQV HCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCHHHH LFNLMLTLWPVEAWAQPLQDIGWYLVDTENSRTVFDENQQPIIKIDYQAEPGIHKTAGNI HHHHHHHHHCHHHHHHHHHHCCEEEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHHHH VFKHLIQGYTITIQTLNSTIVDNPSKS HHHHHHCCEEEEEEEECCEECCCCCCC >Mature Secondary Structure MNKTIKIALAVGLGLLLSACSMVSQQPTGASVAIDKDTELALPLPAELGYSFTASQLISA CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCHHHHCCCCCHHHHHHH TWQDDTQQLPVQVEVTPDKVVLAGFSSWGTRILSLQYQNQTIDTQVLSGLGATLPLPEQV HCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCHHHH LFNLMLTLWPVEAWAQPLQDIGWYLVDTENSRTVFDENQQPIIKIDYQAEPGIHKTAGNI HHHHHHHHHCHHHHHHHHHHCCEEEEECCCCCEEECCCCCCEEEEEECCCCCCHHHHHHH VFKHLIQGYTITIQTLNSTIVDNPSKS HHHHHHCCEEEEEEEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA