| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is lnt [H]
Identifier: 218708741
GI number: 218708741
Start: 755965
End: 757482
Strand: Reverse
Name: lnt [H]
Synonym: VS_0720
Alternate gene names: 218708741
Gene position: 757482-755965 (Counterclockwise)
Preceding gene: 218708742
Following gene: 218708739
Centisome position: 22.96
GC content: 46.51
Gene sequence:
>1518_bases ATGACTAAGACCTTTATTCATCGCCTATTACGGCCGCTAGCGGCCGTTTTTGTTGGCGCTATAACCACCCTTTCATTCGC TCCATACTCTATATGGCCTCTTGCTATTCTCAGCCCAGCTTTGTTGCTGTTACTGATTCATAACCGCTCTCCTAAGAGTG CGCTTTGGGTTGGCTACGCATGGGGTTTAGGTCAATTCACGACAGGTATCAGCTGGGTATACGTCAGCATTGATGGTTTT GGCGGCATGCCACTGGCTGCCAACCTATTTTTGATGGCATTGCTTGTTGGCTACCTAGCCGTTTATTCGGGTCTATTTAC CTGGAGTTTGAACAAGTTCTTCCCTGCTAATAACCTAAGCCGCTTTTTCCTTGCAGCTCCTGCATTGTGGTTAATCAGTG ATTGGCTACGTGGCTGGGTAATGACGGGCTTCCCTTGGCTTTGGTTAGGCTACAGCCAAATCGATTCGCCACTAGGTTCA TTTGCACCGATTGGCGGCGTCGAGTTAGTAACTCTAGCGATCATTGTTTCAGCCTCTGCATTCGCTTATGCGATTGTTAA CAGGGCCTGGAGTATCGCTATCATTCCTGCCGTCGTATTTAGCACCGGTTTTGGTATTCGCAACATCGATTGGGTCACGC CGAACCCTGAAAAAACTACGTCAGTCGTCTTAATACAAGGCAACGTCGATCAAGACAGTAAATGGCTGCCGAGTCATCGC TGGCCAACCATGATGAAGTACACCGACCTAAGCAGAGAAAACTGGGACGCCGATATCATCATCTGGCCTGAAGCGGCTAT TCCAGCATTCGAAGTTGAGATCCCATCTTTCCTACGTAACTTGGATAGCGCAGCGAAAATGAACAACAGTTCGATCATTA CCGGTGTGCTGAATCAGTCTGAAGATAAGAAATACTACAACAGTGTTCTTTCTCTCGGTGTGAATCCATACGGTGAGTAC AGCTACGATCCAGACGAACGCTACCATAAACACCACCTGTTACCATTTGGTGAGTTTGTGCCGTTTGAAGATATCTTGCG TCCATTAGCACCTTTCTTTAACTTGCCAATGTCATCATTTAGCCGTGGCGACTTTGTTCAACCAAACATCGTAGCAAATG GTCGTCATCTAGCACCTGCGTTGTGTTATGAGATCATATTTAATGATCAAGTTAGACAAAACGTAACAGATGAAACTGAC TTTATTCTAACGCTCTCTAACGATGCGTGGTTTGGTCGTTCGATTGGGCCATTGCAACATATGGAAATTGCACAGATGCG CGCTCTAGAGCTTGGTAAGCCGCTTATTCGCTCTACCAACAATGGTGTGACGGCTGTTACCGATTATAAAGGCAACATCA TCAAACAAGTGCCTCAGTTTGAAACGGCCGTATTAAAAGCTGAACTCATTTCAACGGATGGTCAAACGCCTTATCACACA GTTGGTACTTGGCCACTGTATGTCTGGGCGTTGCTCAGCTTGGTGATGGGTTGGCTAATTAGAAAGCCAAAGAGCTAG
Upstream 100 bases:
>100_bases ACCGTCGTGTGATTCAGCTACAGGTAACGATACCTGACGAACAACCTCTTCCGACTATCGAAGAATAACAACTTCTCTCT AAAGAGATGACAGAAATTAG
Downstream 100 bases:
>100_bases ATTCGAAGAAAAGTGATTCGAGGGTTGACTGGTGGGTCAACCCTTTTTTATTGCCGCAGTTTGAAGTTAATTACATGTTT ACGGCTTAAGTGCTTTGCGG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTKTFIHRLLRPLAAVFVGAITTLSFAPYSIWPLAILSPALLLLLIHNRSPKSALWVGYAWGLGQFTTGISWVYVSIDGF GGMPLAANLFLMALLVGYLAVYSGLFTWSLNKFFPANNLSRFFLAAPALWLISDWLRGWVMTGFPWLWLGYSQIDSPLGS FAPIGGVELVTLAIIVSASAFAYAIVNRAWSIAIIPAVVFSTGFGIRNIDWVTPNPEKTTSVVLIQGNVDQDSKWLPSHR WPTMMKYTDLSRENWDADIIIWPEAAIPAFEVEIPSFLRNLDSAAKMNNSSIITGVLNQSEDKKYYNSVLSLGVNPYGEY SYDPDERYHKHHLLPFGEFVPFEDILRPLAPFFNLPMSSFSRGDFVQPNIVANGRHLAPALCYEIIFNDQVRQNVTDETD FILTLSNDAWFGRSIGPLQHMEIAQMRALELGKPLIRSTNNGVTAVTDYKGNIIKQVPQFETAVLKAELISTDGQTPYHT VGTWPLYVWALLSLVMGWLIRKPKS
Sequences:
>Translated_505_residues MTKTFIHRLLRPLAAVFVGAITTLSFAPYSIWPLAILSPALLLLLIHNRSPKSALWVGYAWGLGQFTTGISWVYVSIDGF GGMPLAANLFLMALLVGYLAVYSGLFTWSLNKFFPANNLSRFFLAAPALWLISDWLRGWVMTGFPWLWLGYSQIDSPLGS FAPIGGVELVTLAIIVSASAFAYAIVNRAWSIAIIPAVVFSTGFGIRNIDWVTPNPEKTTSVVLIQGNVDQDSKWLPSHR WPTMMKYTDLSRENWDADIIIWPEAAIPAFEVEIPSFLRNLDSAAKMNNSSIITGVLNQSEDKKYYNSVLSLGVNPYGEY SYDPDERYHKHHLLPFGEFVPFEDILRPLAPFFNLPMSSFSRGDFVQPNIVANGRHLAPALCYEIIFNDQVRQNVTDETD FILTLSNDAWFGRSIGPLQHMEIAQMRALELGKPLIRSTNNGVTAVTDYKGNIIKQVPQFETAVLKAELISTDGQTPYHT VGTWPLYVWALLSLVMGWLIRKPKS >Mature_504_residues TKTFIHRLLRPLAAVFVGAITTLSFAPYSIWPLAILSPALLLLLIHNRSPKSALWVGYAWGLGQFTTGISWVYVSIDGFG GMPLAANLFLMALLVGYLAVYSGLFTWSLNKFFPANNLSRFFLAAPALWLISDWLRGWVMTGFPWLWLGYSQIDSPLGSF APIGGVELVTLAIIVSASAFAYAIVNRAWSIAIIPAVVFSTGFGIRNIDWVTPNPEKTTSVVLIQGNVDQDSKWLPSHRW PTMMKYTDLSRENWDADIIIWPEAAIPAFEVEIPSFLRNLDSAAKMNNSSIITGVLNQSEDKKYYNSVLSLGVNPYGEYS YDPDERYHKHHLLPFGEFVPFEDILRPLAPFFNLPMSSFSRGDFVQPNIVANGRHLAPALCYEIIFNDQVRQNVTDETDF ILTLSNDAWFGRSIGPLQHMEIAQMRALELGKPLIRSTNNGVTAVTDYKGNIIKQVPQFETAVLKAELISTDGQTPYHTV GTWPLYVWALLSLVMGWLIRKPKS
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=487, Percent_Identity=47.6386036960986, Blast_Score=466, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 56520; Mature: 56389
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTFIHRLLRPLAAVFVGAITTLSFAPYSIWPLAILSPALLLLLIHNRSPKSALWVGYA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE WGLGQFTTGISWVYVSIDGFGGMPLAANLFLMALLVGYLAVYSGLFTWSLNKFFPANNLS CCCHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCH RFFLAAPALWLISDWLRGWVMTGFPWLWLGYSQIDSPLGSFAPIGGVELVTLAIIVSASA HHHHHHHHHHHHHHHHHHHHHCCCHHEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH FAYAIVNRAWSIAIIPAVVFSTGFGIRNIDWVTPNPEKTTSVVLIQGNVDQDSKWLPSHR HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC WPTMMKYTDLSRENWDADIIIWPEAAIPAFEVEIPSFLRNLDSAAKMNNSSIITGVLNQS CCCHHHECCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCC EDKKYYNSVLSLGVNPYGEYSYDPDERYHKHHLLPFGEFVPFEDILRPLAPFFNLPMSSF CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHC SRGDFVQPNIVANGRHLAPALCYEIIFNDQVRQNVTDETDFILTLSNDAWFGRSIGPLQH CCCCCCCCCEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHH MEIAQMRALELGKPLIRSTNNGVTAVTDYKGNIIKQVPQFETAVLKAELISTDGQTPYHT HHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHCCCCCCCCEE VGTWPLYVWALLSLVMGWLIRKPKS CCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKTFIHRLLRPLAAVFVGAITTLSFAPYSIWPLAILSPALLLLLIHNRSPKSALWVGYA CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE WGLGQFTTGISWVYVSIDGFGGMPLAANLFLMALLVGYLAVYSGLFTWSLNKFFPANNLS CCCHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCH RFFLAAPALWLISDWLRGWVMTGFPWLWLGYSQIDSPLGSFAPIGGVELVTLAIIVSASA HHHHHHHHHHHHHHHHHHHHHCCCHHEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH FAYAIVNRAWSIAIIPAVVFSTGFGIRNIDWVTPNPEKTTSVVLIQGNVDQDSKWLPSHR HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC WPTMMKYTDLSRENWDADIIIWPEAAIPAFEVEIPSFLRNLDSAAKMNNSSIITGVLNQS CCCHHHECCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCC EDKKYYNSVLSLGVNPYGEYSYDPDERYHKHHLLPFGEFVPFEDILRPLAPFFNLPMSSF CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHC SRGDFVQPNIVANGRHLAPALCYEIIFNDQVRQNVTDETDFILTLSNDAWFGRSIGPLQH CCCCCCCCCEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHH MEIAQMRALELGKPLIRSTNNGVTAVTDYKGNIIKQVPQFETAVLKAELISTDGQTPYHT HHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHCCCCCCCCEE VGTWPLYVWALLSLVMGWLIRKPKS CCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]