| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is leuS [H]
Identifier: 218708739
GI number: 218708739
Start: 752576
End: 755152
Strand: Reverse
Name: leuS [H]
Synonym: VS_0718
Alternate gene names: 218708739
Gene position: 755152-752576 (Counterclockwise)
Preceding gene: 218708741
Following gene: 218708738
Centisome position: 22.89
GC content: 46.6
Gene sequence:
>2577_bases ATGCAAGAACAATATAACCCGCAAGAGATTGAACAAAAGGTTCAACAACACTGGGATGACAGCGAGACTTTCGTTGTAAG TGAAGACCCAAACAAAGAAAAATTCTACTGTCTTTCTATGTTCCCGTACCCAAGTGGCCGACTGCACATGGGTCACGTGC GTAACTACACCATCGGTGATGTGGTATCTCGTTTCCAACGTCTACAAGGCAAAAACGTAATGCAGCCAATCGGTTGGGAT GCATTCGGCCTACCTGCAGAAAACGCAGCTGTAAAAAACAACACAGCGCCTGCTCCGTGGACTTACGAAAACATCGAATA CATGAAAAACCAGCTTAAACTTTTAGGCTTTGGTTACGACTGGAAACGTGAATTCGCAACATGTACTCCTGAGTACTACC GTTGGGAACAAGAGTTCTTCACGAAGCTTTACGAACAAGGCCTAGTTTACAAGAAGACATCTTCTGTTAACTGGTGTCCA AACGACCAAACTGTACTAGCGAACGAGCAAGTAGAAGACGGTTGCTGCTGGCGTTGTGACACTCCGGTAGAACAAAAGAA GATCCCACAATGGTTCATTAAAATCACTGAGTACGCTCAAGAGCTACTAGACGATCTAGACAACCTTGAAGGTTGGCCTG AAATGGTTAAGACCATGCAGCGCAACTGGATCGGTCGCTCTGAAGGTGTAGAGCTATCTTTCGCTGTTAACGGTGAAGAA GCGCCACTAGAAGTGTATACAACTCGTCCAGACACACTAATGGGTGTTTCTTATGTTGGTATCGCTGCAGGTCACCCACT TGCAGAGAAAGCATCAAAGAACAACCCAGAGCTTGCAGCATTCGTTGAAGAGTGTCGTAACACCAAAGTGGCTGAAGCAG AACTAGCAACGATGGAAAAGAAAGGTATGGATACTGGCCTAACGGCTATCCACCCTCTTAACGGTCGTGTTGTTCCTGTT TACGTAGCTAACTTCGTTCTTATGGATTACGGCACAGGTGCTGTAATGGCGGTTCCTGCTCACGATCAACGTGACTACGA ATTCGCTACTAAGTACGGCATCGATATCATCCCAGTAATCAAGCCAGAAGATGGTTCTGAGCTAGATGTGTCTGAAGCGG CTTACACTGAGAAAGGTGTACTGTTCGATTCTGGTGAATTCGATGGTCTTGCATTCCAAGAAGCATTCGATGCAATCGCT GCGAAGCTTGAAGCTGAAGGCAAAGGTAAGAAAACAGTAAACTTCCGTCTACGTGACTGGGGCGTTTCTCGTCAGCGTTA CTGGGGTGCTCCAATCCCAATGGTAACCACTGAAGACGGTGAAGTTCACCCTGTACCAGCAGACCAACTGCCCGTTATTC TTCCAGAAGACGTGGTAATGGATGGCGTAACTAGCCCAATCAAGGCGGATAAGTCTTGGGCTGAAACCACATTCAATGGC GAACCTGCGCTACGTGAAACTGATACGTTCGATACGTTCATGGAATCCTCATGGTACTACGCACGTTACTGTTCACCACA AGCTGACGACATTCTAGATCCTGAGAAAGCAAACTACTGGTTGCCAGTTGACCAATACGTTGGTGGTATCGAGCACGCAT GTATGCACCTGCTTTACTCTCGTTTCTTCCATAAGCTTCTACGTGATGCTGGTTACGTGACGTCTGACGAACCGTTCAAG CAACTACTGTGTCAAGGCATGGTTCTGGCTGACGCGTTCTATCACGAAAACGAAAAAGGCACCAAAGAGTGGATTGCACC GACTGACGTAACGGTTGAACGTGACGGTAAAGGTCGCATCGAAAAAGCAGTCGACGATCAAGGTCGTGAAGTTGAACACT CAGGCATGATCAAAATGTCTAAGTCTAAGAACAACGGTATCGACCCACAAGAGATGGTAGACAAGTACGGCGCTGATACT GTACGTCTATTCATGATGTTTGCATCGCCTGCAGACATGACGCTTGAGTGGCAAGAGTCTGGCGTTGAAGGGGCAAACCG TTTCCTTAAGCGTGTTTGGAAACTGGTTCACGCTCACTCTTCTAAAGGTGCAGCTGAAACTGTTGATGCTTCTGCTCTAT CTGGTAACCAGAAAGCACTTCGTCGTGATATCCACAAAACTATCGCGAAAGTAACGGACGATATCGGCCGTCGCCAAACG TTCAACACAGCAATAGCTGCAATCATGGAGCTGATGAACAAGCTAGCGAAAGCGCCTCAAGAGTCTGTACAAGATCGTGC AATTCTTGATGAAGCACTAAAAGCAGTTGTACGTATGCTTTACCCTATGACGCCACACATCTCTTACGAAATGTGGATTG CGCTTGGTGAATCAAACGTAGACTCAGCAACATGGCCAACGTTTGACGAGAAAGCGCTAGTTGAAGACGAGAAGACTATC GTTGTAATGATCAACGGTAAGCTACGTGCGAAGCTAACGGTTGCAGCTGATGCAACAGAAGAGCAAGTTCGTGAGCTTGG TCTAAACGATGAGAACGCTAAGAAATTCCTAGATGGCTTAACTATCCGTAAAGTTATCTTCGTACCTGGTAAGCTTCTAA ACATCGTTGCTAACTAA
Upstream 100 bases:
>100_bases ATAACTATTGTTGTACTCAGCTCCTTTAGGTATTCTATGACGATCTGTAAGATTCTGTTCTAACCGAACTCACAAATTCC AAGATAACCGGATACCATCG
Downstream 100 bases:
>100_bases TTTCGTTAGCACAGTGCAATTACTGAAGAATTAACGAACTTAATTCATCAAAAGCAGTCTGTAGACAGGGTAGCTAATAG CCCTGTCTACTTATTTAAGC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 858; Mature: 858
Protein sequence:
>858_residues MQEQYNPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWD AFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWKREFATCTPEYYRWEQEFFTKLYEQGLVYKKTSSVNWCP NDQTVLANEQVEDGCCWRCDTPVEQKKIPQWFIKITEYAQELLDDLDNLEGWPEMVKTMQRNWIGRSEGVELSFAVNGEE APLEVYTTRPDTLMGVSYVGIAAGHPLAEKASKNNPELAAFVEECRNTKVAEAELATMEKKGMDTGLTAIHPLNGRVVPV YVANFVLMDYGTGAVMAVPAHDQRDYEFATKYGIDIIPVIKPEDGSELDVSEAAYTEKGVLFDSGEFDGLAFQEAFDAIA AKLEAEGKGKKTVNFRLRDWGVSRQRYWGAPIPMVTTEDGEVHPVPADQLPVILPEDVVMDGVTSPIKADKSWAETTFNG EPALRETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGYVTSDEPFK QLLCQGMVLADAFYHENEKGTKEWIAPTDVTVERDGKGRIEKAVDDQGREVEHSGMIKMSKSKNNGIDPQEMVDKYGADT VRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVHAHSSKGAAETVDASALSGNQKALRRDIHKTIAKVTDDIGRRQT FNTAIAAIMELMNKLAKAPQESVQDRAILDEALKAVVRMLYPMTPHISYEMWIALGESNVDSATWPTFDEKALVEDEKTI VVMINGKLRAKLTVAADATEEQVRELGLNDENAKKFLDGLTIRKVIFVPGKLLNIVAN
Sequences:
>Translated_858_residues MQEQYNPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWD AFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWKREFATCTPEYYRWEQEFFTKLYEQGLVYKKTSSVNWCP NDQTVLANEQVEDGCCWRCDTPVEQKKIPQWFIKITEYAQELLDDLDNLEGWPEMVKTMQRNWIGRSEGVELSFAVNGEE APLEVYTTRPDTLMGVSYVGIAAGHPLAEKASKNNPELAAFVEECRNTKVAEAELATMEKKGMDTGLTAIHPLNGRVVPV YVANFVLMDYGTGAVMAVPAHDQRDYEFATKYGIDIIPVIKPEDGSELDVSEAAYTEKGVLFDSGEFDGLAFQEAFDAIA AKLEAEGKGKKTVNFRLRDWGVSRQRYWGAPIPMVTTEDGEVHPVPADQLPVILPEDVVMDGVTSPIKADKSWAETTFNG EPALRETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGYVTSDEPFK QLLCQGMVLADAFYHENEKGTKEWIAPTDVTVERDGKGRIEKAVDDQGREVEHSGMIKMSKSKNNGIDPQEMVDKYGADT VRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVHAHSSKGAAETVDASALSGNQKALRRDIHKTIAKVTDDIGRRQT FNTAIAAIMELMNKLAKAPQESVQDRAILDEALKAVVRMLYPMTPHISYEMWIALGESNVDSATWPTFDEKALVEDEKTI VVMINGKLRAKLTVAADATEEQVRELGLNDENAKKFLDGLTIRKVIFVPGKLLNIVAN >Mature_858_residues MQEQYNPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQGKNVMQPIGWD AFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWKREFATCTPEYYRWEQEFFTKLYEQGLVYKKTSSVNWCP NDQTVLANEQVEDGCCWRCDTPVEQKKIPQWFIKITEYAQELLDDLDNLEGWPEMVKTMQRNWIGRSEGVELSFAVNGEE APLEVYTTRPDTLMGVSYVGIAAGHPLAEKASKNNPELAAFVEECRNTKVAEAELATMEKKGMDTGLTAIHPLNGRVVPV YVANFVLMDYGTGAVMAVPAHDQRDYEFATKYGIDIIPVIKPEDGSELDVSEAAYTEKGVLFDSGEFDGLAFQEAFDAIA AKLEAEGKGKKTVNFRLRDWGVSRQRYWGAPIPMVTTEDGEVHPVPADQLPVILPEDVVMDGVTSPIKADKSWAETTFNG EPALRETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGYVTSDEPFK QLLCQGMVLADAFYHENEKGTKEWIAPTDVTVERDGKGRIEKAVDDQGREVEHSGMIKMSKSKNNGIDPQEMVDKYGADT VRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVHAHSSKGAAETVDASALSGNQKALRRDIHKTIAKVTDDIGRRQT FNTAIAAIMELMNKLAKAPQESVQDRAILDEALKAVVRMLYPMTPHISYEMWIALGESNVDSATWPTFDEKALVEDEKTI VVMINGKLRAKLTVAADATEEQVRELGLNDENAKKFLDGLTIRKVIFVPGKLLNIVAN
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=887, Percent_Identity=35.9639233370913, Blast_Score=523, Evalue=1e-148, Organism=Homo sapiens, GI5454158, Length=389, Percent_Identity=24.9357326478149, Blast_Score=100, Evalue=1e-20, Organism=Homo sapiens, GI46852147, Length=178, Percent_Identity=26.9662921348315, Blast_Score=71, Evalue=5e-12, Organism=Escherichia coli, GI1786861, Length=858, Percent_Identity=74.3589743589744, Blast_Score=1358, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=377, Percent_Identity=25.7294429708223, Blast_Score=119, Evalue=9e-28, Organism=Caenorhabditis elegans, GI71997517, Length=813, Percent_Identity=32.4723247232472, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI71997510, Length=813, Percent_Identity=32.4723247232472, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI212645227, Length=383, Percent_Identity=30.8093994778068, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71980946, Length=154, Percent_Identity=31.1688311688312, Blast_Score=74, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17554638, Length=86, Percent_Identity=38.3720930232558, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323414, Length=847, Percent_Identity=36.3636363636364, Blast_Score=504, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6321531, Length=386, Percent_Identity=25.3886010362694, Blast_Score=105, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6325217, Length=156, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI21355409, Length=883, Percent_Identity=33.8618346545866, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI281366294, Length=163, Percent_Identity=31.9018404907975, Blast_Score=82, Evalue=2e-15,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96922; Mature: 96922
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEQYNPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCHHH VVSRFQRLQGKNVMQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC WKREFATCTPEYYRWEQEFFTKLYEQGLVYKKTSSVNWCPNDQTVLANEQVEDGCCWRCD HHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCC TPVEQKKIPQWFIKITEYAQELLDDLDNLEGWPEMVKTMQRNWIGRSEGVELSFAVNGEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC APLEVYTTRPDTLMGVSYVGIAAGHPLAEKASKNNPELAAFVEECRNTKVAEAELATMEK CCEEEEECCCCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGMDTGLTAIHPLNGRVVPVYVANFVLMDYGTGAVMAVPAHDQRDYEFATKYGIDIIPVI CCCCCCCCEEECCCCCEEEEEEHEEEEEECCCCEEEEECCCCCCCCHHHHHCCCEEEEEE KPEDGSELDVSEAAYTEKGVLFDSGEFDGLAFQEAFDAIAAKLEAEGKGKKTVNFRLRDW CCCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC GVSRQRYWGAPIPMVTTEDGEVHPVPADQLPVILPEDVVMDGVTSPIKADKSWAETTFNG CCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCCHHHHCCCCCCCCCCCCHHHCCCCC EPALRETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYS CCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHCHHHHHHHHHHHH RFFHKLLRDAGYVTSDEPFKQLLCQGMVLADAFYHENEKGTKEWIAPTDVTVERDGKGRI HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCH EKAVDDQGREVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQES HHHHCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHCCHHEEEEHHHCCCCCCEEEEHHC GVEGANRFLKRVWKLVHAHSSKGAAETVDASALSGNQKALRRDIHKTIAKVTDDIGRRQT CCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FNTAIAAIMELMNKLAKAPQESVQDRAILDEALKAVVRMLYPMTPHISYEMWIALGESNV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC DSATWPTFDEKALVEDEKTIVVMINGKLRAKLTVAADATEEQVRELGLNDENAKKFLDGL CCCCCCCCCCCCEECCCCEEEEEECCCEEEEEEEECCCCHHHHHHCCCCCHHHHHHHHCH TIRKVIFVPGKLLNIVAN HHHHHEECCHHHHHHHCC >Mature Secondary Structure MQEQYNPQEIEQKVQQHWDDSETFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEECCCCCCCHHH VVSRFQRLQGKNVMQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCC WKREFATCTPEYYRWEQEFFTKLYEQGLVYKKTSSVNWCPNDQTVLANEQVEDGCCWRCD HHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCC TPVEQKKIPQWFIKITEYAQELLDDLDNLEGWPEMVKTMQRNWIGRSEGVELSFAVNGEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCC APLEVYTTRPDTLMGVSYVGIAAGHPLAEKASKNNPELAAFVEECRNTKVAEAELATMEK CCEEEEECCCCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGMDTGLTAIHPLNGRVVPVYVANFVLMDYGTGAVMAVPAHDQRDYEFATKYGIDIIPVI CCCCCCCCEEECCCCCEEEEEEHEEEEEECCCCEEEEECCCCCCCCHHHHHCCCEEEEEE KPEDGSELDVSEAAYTEKGVLFDSGEFDGLAFQEAFDAIAAKLEAEGKGKKTVNFRLRDW CCCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC GVSRQRYWGAPIPMVTTEDGEVHPVPADQLPVILPEDVVMDGVTSPIKADKSWAETTFNG CCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEECCCHHHHCCCCCCCCCCCCHHHCCCCC EPALRETDTFDTFMESSWYYARYCSPQADDILDPEKANYWLPVDQYVGGIEHACMHLLYS CCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHCHHHHHHHHHHHH RFFHKLLRDAGYVTSDEPFKQLLCQGMVLADAFYHENEKGTKEWIAPTDVTVERDGKGRI HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCCCEEEECCCCCCH EKAVDDQGREVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFASPADMTLEWQES HHHHCCCCCEECCCCCEEEECCCCCCCCHHHHHHHHCCHHEEEEHHHCCCCCCEEEEHHC GVEGANRFLKRVWKLVHAHSSKGAAETVDASALSGNQKALRRDIHKTIAKVTDDIGRRQT CCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FNTAIAAIMELMNKLAKAPQESVQDRAILDEALKAVVRMLYPMTPHISYEMWIALGESNV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC DSATWPTFDEKALVEDEKTIVVMINGKLRAKLTVAADATEEQVRELGLNDENAKKFLDGL CCCCCCCCCCCCEECCCCEEEEEECCCEEEEEEEECCCCHHHHHHCCCCCHHHHHHHHCH TIRKVIFVPGKLLNIVAN HHHHHEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA