Definition | Escherichia coli UMN026 chromosome, complete genome. |
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Accession | NC_011751 |
Length | 5,202,090 |
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The map label for this gene is frmB [H]
Identifier: 218703642
GI number: 218703642
Start: 435395
End: 436228
Strand: Reverse
Name: frmB [H]
Synonym: ECUMN_0398
Alternate gene names: 218703642
Gene position: 436228-435395 (Counterclockwise)
Preceding gene: 218703643
Following gene: 218703633
Centisome position: 8.39
GC content: 47.96
Gene sequence:
>834_bases ATGGAACTCATTGAAAAACATGCCAGCTTTGGCGGCTGGCAAAATGTGTATCGGCATTATTCCCCATCACTGAAATGTGA AATGAATGTCGGCGTCTATCTCCCACCAAAAGCCGCAAGTGAAAAATTGCCGGTGTTGTACTGGCTTTCAGGGCTGACTT GCAACGAGCAGAATTTCATTACTAAATCGGGGATGCAACGTTACGCGGCTGAGCACAACATTATTGTTGTTGCGCCGGAC ACCAGTCCGCGAGGCAGTCATGTCGCAGATGCTGACCGTTACGATCTCGGGCAAGGTGCCGGGTTTTACCTGAACGCAAC GCAAGCGCCGTGGAATGAACATTACAAAATGTATGACTATATCCGCAACGAGCTGCCGGATTTAGTGATGCAACATTTTC CGGCAACGGCCAGAAAGTCTATCTCAGGTCATTCTATGGGCGGGCTGGGCGCACTGGTGCTGGCGTTACGTAATCCAGAT GAATATGTCAGCGTCTCAGCGTTTTCGCCCATTGTCTCCCCATCGCAAGTACCGTGGGGACAGCAAGCCTTTACCGCATA TCTTGGTGAAAATAAAGAAGCCTGGTTGGATTACGACCCGGTGAGCCTTATTTCACAAGGTCAACGCGTTGCGGAAATCA TGGTTGATCAGGGGTTGAGTGATGATTTTTACGCAGAACAGCTGCGGACTCCAAATCTTGAAAAGATCTGCCAGGAGATG AATATCAAGACGTTAATCCGTTATCACGAGGGTTATGATCACAGCTATTATTTTGTCTCCAGTTTTATTGGCGAGCATAT TGCCTATCACGCCAATAAACTGAATATGCGTTAA
Upstream 100 bases:
>100_bases CGTTACTGATTTCCCGCAGGTTTACCCGTCCAGTTCAGACGGGGTTCTTAATACTCTCCCCGGGCAGCCGTCCGGGGGAT TAACCGTGAGATAATGACTG
Downstream 100 bases:
>100_bases TAATAGTGCACGACTGCCGGATGCGGCGTGAACGCCTTATCCGCCTACATTTCGCCCGCAGGCCGTAGGCATGATAAGAC GCGCATAGCGTCGCATCAGG
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAASEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPD TSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPATARKSISGHSMGGLGALVLALRNPD EYVSVSAFSPIVSPSQVPWGQQAFTAYLGENKEAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR
Sequences:
>Translated_277_residues MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAASEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPD TSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPATARKSISGHSMGGLGALVLALRNPD EYVSVSAFSPIVSPSQVPWGQQAFTAYLGENKEAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR >Mature_277_residues MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAASEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPD TSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPATARKSISGHSMGGLGALVLALRNPD EYVSVSAFSPIVSPSQVPWGQQAFTAYLGENKEAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=280, Percent_Identity=49.6428571428571, Blast_Score=289, Evalue=2e-78, Organism=Escherichia coli, GI1786551, Length=277, Percent_Identity=96.7509025270758, Blast_Score=566, Evalue=1e-163, Organism=Escherichia coli, GI1788477, Length=276, Percent_Identity=54.3478260869565, Blast_Score=314, Evalue=3e-87, Organism=Caenorhabditis elegans, GI17510185, Length=280, Percent_Identity=46.7857142857143, Blast_Score=254, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6322393, Length=298, Percent_Identity=40.9395973154362, Blast_Score=214, Evalue=1e-56, Organism=Drosophila melanogaster, GI45551932, Length=281, Percent_Identity=49.8220640569395, Blast_Score=283, Evalue=9e-77, Organism=Drosophila melanogaster, GI24648347, Length=281, Percent_Identity=49.8220640569395, Blast_Score=282, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31356; Mature: 31356
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAASEKLPVLYWLSGLTCNEQNFI CCHHHHHHCCCCHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCEECCCCCH TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH IRNELPDLVMQHFPATARKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWG HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHEEEEECCCCCEEEEECCCCCCCCCCCCCC QQAFTAYLGENKEAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM HHHHHHHHCCCCCCEECCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHC NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MELIEKHASFGGWQNVYRHYSPSLKCEMNVGVYLPPKAASEKLPVLYWLSGLTCNEQNFI CCHHHHHHCCCCHHHHHHHCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCEECCCCCH TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH IRNELPDLVMQHFPATARKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWG HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHEEEEECCCCCEEEEECCCCCCCCCCCCCC QQAFTAYLGENKEAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM HHHHHHHHCCCCCCEECCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHC NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA