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The map label for this gene is yagQ [H]

Identifier: 218703563

GI number: 218703563

Start: 340183

End: 341139

Strand: Reverse

Name: yagQ [H]

Synonym: ECUMN_0314

Alternate gene names: 218703563

Gene position: 341139-340183 (Counterclockwise)

Preceding gene: 218703564

Following gene: 218703560

Centisome position: 6.56

GC content: 59.98

Gene sequence:

>957_bases
ATGTCATACTCGCTTTTTGACAAAGACGAGCACTGGCATAAGCCAGAGCAGGCGTTTCTCACCGATGACCACCGGACCAT
TCTGCGCTTCGCCGTAGAGGCGCTAATGTCCGGTAAAGGAGCGGTGCTGGTGACGCTGGTGGAGATACGCGGCGGCGCGG
CGCGCCCGCTCGGGGCGCAGATGGTGGTGCGCGAAGATGGCCGTTACTGCGGTTTTGTCTCTGGCGGCTGCGTGGAGGCC
GCTGCCGCTTTTGAAGCGCTGGAGGTGATGGGCTCAGGCCGCGATCGCGAAATTTGCTATGGCGAAGGTTCGCCGTGGTT
TGACATCGTTCTGCCCTGCGGCGGTGGGATCACGCTGACGCTCCATAAACTACGCTCGGCACAGCCTCTGCTCGCCGTGC
TGAACCGCCTGGAACAGAGAAAACCGGCGGGTCTGCGCTACGATCCGCAAGCTCAATCGCTGGTGTGCCTGCCCACGCAA
ACCCGGACGGGCTGGAATCTCAATGGCTTTGAGGTGGGGTTCAGGCCATGCGTCAGTCTGATGATTTACGGACGTTCTCT
TGAGGCGCAGGCAACCGCGAGTCTTGCAGCAGCCACAGGCTATGACAGCCATATCTTCGATCTTTTTCCGGCCTCAGCCA
GCGCTCAGATCGATACCGATACGGCGGTCATTTTGCTGTGCCATGATCTCAACCGGGAGCTGCCAGTGTTGCAGGCCGCG
CGAGAAGCAAAACCCTTTTATCTCGGCGCATTGGGCAGCTATCGAACCCACACTTTACGTCTGCAAAAGCTCCACGAGCT
GGGATGGTCCAGGGAGGAGACAGCGCAAATCCGGGCACCCGTCGGGATATTCCCCAAAGCCCGGGATGCGCATACTCTGG
CACTCTCCGTGCTGGCAGAAGTCGCCTCTGTACGTCTCCATCAGGATGAGGATTCATGCCTGCCCCCGTCGTCCTGA

Upstream 100 bases:

>100_bases
CAACGCGGTGTATAACGCCACCGGTATTCGGGTACGGGATTATCCCATCACTCTGGATAAGCTGCTCGATAAACTGCCGG
ATGTGGTTTAAGGAGGAACA

Downstream 100 bases:

>100_bases
TCCTTGCGGCCGGGCGTGGAGAGCGCTTTCTCGCCTCCGGGGGAAATACCCATAAATTAAGAGAAAAAATCTGCAGTAGC
CGTTTTAGAAAATCACCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSYSLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEA
AAAFEALEVMGSGRDREICYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQ
TRTGWNLNGFEVGFRPCVSLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQDEDSCLPPSS

Sequences:

>Translated_318_residues
MSYSLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEA
AAAFEALEVMGSGRDREICYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQ
TRTGWNLNGFEVGFRPCVSLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQDEDSCLPPSS
>Mature_317_residues
SYSLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAA
AAFEALEVMGSGRDREICYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQT
RTGWNLNGFEVGFRPCVSLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAR
EAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQDEDSCLPPSS

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=318, Percent_Identity=97.7987421383648, Blast_Score=598, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 34718; Mature: 34587

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQ
CCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCE
MVVREDGRYCGFVSGGCVEAAAAFEALEVMGSGRDREICYGEGSPWFDIVLPCGGGITLT
EEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEE
LHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVSL
EEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCHHHHHHH
MIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
HHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCEECCCCEEEEEEECCCCCCHHHHHH
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARDAHTLALSVLAE
HHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCCCHHHHHHHHHHH
VASVRLHQDEDSCLPPSS
HHHHEEECCCCCCCCCCC
>Mature Secondary Structure 
SYSLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQ
CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCE
MVVREDGRYCGFVSGGCVEAAAAFEALEVMGSGRDREICYGEGSPWFDIVLPCGGGITLT
EEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEE
LHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVSL
EEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCHHHHHHH
MIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
HHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCEECCCCEEEEEEECCCCCCHHHHHH
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARDAHTLALSVLAE
HHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCCCHHHHHHHHHHH
VASVRLHQDEDSCLPPSS
HHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]