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The map label for this gene is yncI

Identifier: 218693700

GI number: 218693700

Start: 269718

End: 270464

Strand: Direct

Name: yncI

Synonym: EC55989_0240

Alternate gene names: 218693700

Gene position: 269718-270464 (Clockwise)

Preceding gene: 218693699

Following gene: 218693701

Centisome position: 5.23

GC content: 38.02

Gene sequence:

>747_bases
GTGAGTATTCAAAGTTTGCTTGATTATATTTCAGTGATCCCTGATATACGACAACAAGGAAAGGTTAAACATAAATTATC
TGCTATTTTGTTTCTCACCGTATGTGCAGTAATTGCAGGTGCCGATGAGTGGCAGGAAATTGAAGATTTTGGACATGAAA
GACTTGAATGGCTAAAGAAATATGGTGATTTTGATAATGGCATTCCGGTCGATGACACCATTGCACGCGTTGTGAGTAAC
ATTGACAGTTTGGCCTTTGAAAAGATGTTTATTGAATGGATGCAGGAGTGCCATGAAATCACTGATGGTGAAATTATAGC
AATAGATGGAAAGACCATAAGAGGCTCCTTTGATAAGGGAAAAAGAAAAGGAGCAATCCATATGGTGAGTGCATTCTCGA
ACGAAAATGGTGTTGTACTGGGGCAGGTGAAAACGGAAGCCAAAAGTAATGAGATTACAGCCATTCCAGAGTTGCTTAAC
CTACTGTATTTAAAGAAAAATTTGATAACCATTGATGCTGTGGGCTGTCAGAAAGATATCGCTTCGAAGATCAAAGATAA
AAAAGCAGATTATCTTCTGGCAGTAAAAGGCAATCAGGGGAAATTACATCATGCATTCGAGGAAAAATTTCCTGTAAATG
TGTTTTCTAATTATAAAGGCGATTCGTTTAGTACGCAGGAGATAAGTCATGGAAGAAAAGAAACACGTTTGCATATTGTC
AGTAACGTAACGCCTGAACTTTTGTGA

Upstream 100 bases:

>100_bases
AAAATTGTGATGTAAATCACGATTTTCATCTTGGCTTTAACGCCTACAGGTGATCAAAATTTAACCTTTGGAATAACTAA
AAAGATAAAAAAGGACCCAG

Downstream 100 bases:

>100_bases
TTTTGAATTCGAATGGAAGGGATTAAAAAAGCTTTGTGTAGCATTGTCATTCAGGCAGAAGAAAGAAGATAAATCAGCAG
AAGGTGTAAGCATCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSN
IDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLN
LLYLKKNLITIDAVGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIV
SNVTPELL

Sequences:

>Translated_248_residues
MSIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSN
IDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLN
LLYLKKNLITIDAVGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIV
SNVTPELL
>Mature_247_residues
SIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSNI
DSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNL
LYLKKNLITIDAVGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIVS
NVTPELL

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1789896, Length=248, Percent_Identity=59.2741935483871, Blast_Score=314, Evalue=4e-87,
Organism=Escherichia coli, GI1787733, Length=248, Percent_Identity=58.8709677419355, Blast_Score=311, Evalue=3e-86,
Organism=Escherichia coli, GI1786924, Length=248, Percent_Identity=59.2741935483871, Blast_Score=303, Evalue=5e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 27818; Mature: 27687

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKK
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCC
KRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAVGCQKDI
CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHH
ASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIV
HHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHCCHHHHHEEHH
SNVTPELL
HCCCCCCC
>Mature Secondary Structure 
SIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKK
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKG
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCC
KRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAVGCQKDI
CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHH
ASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIV
HHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHCCHHHHHEEHH
SNVTPELL
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]