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The map label for this gene is ydcD

Identifier: 218693699

GI number: 218693699

Start: 269055

End: 269537

Strand: Direct

Name: ydcD

Synonym: EC55989_0239

Alternate gene names: 218693699

Gene position: 269055-269537 (Clockwise)

Preceding gene: 218693698

Following gene: 218693700

Centisome position: 5.22

GC content: 27.33

Gene sequence:

>483_bases
ATGCTTCAAATTATTAGAGGCAAACTTGTCATTTTTTTAATTACCCTTTGTTTATTTGTTGTTTACCTTGGGTTTGATAA
CAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGATATATCTTTCTGAAAAAAATATTA
TTTATAAAATAATTAATGACCAAAAAATTAGTAGAGGGAATGGTCATTTTATAAGTATAATGGTTAATAATTACAGGACG
CACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCAATGATATTCTTTATAGCGTGCGATTAAAAAACATTAGTAAACT
GGAGAATATGGAGTTCTGCGCTAAAAAACAACGGGTGTATTTTAGTGATAAAAACAAGAAGGCTAGTTATAAAATAATTA
ATTATGGAGACTATTACGATGTTGATTATTATGATAACAATTTGAAAAATGAAGTTTTTGACTGGATTGGTAAATGGTCA
TAA

Upstream 100 bases:

>100_bases
TGTAGCGATGCATGTATTGAAAAATATAACACTGGGCAACTCTTCGGGTTAGATGGTATAAAAGCAGATAATCCAATAAA
AGCAAAGCAAGGGAGTTCAG

Downstream 100 bases:

>100_bases
TGAACAACACCAGAAAGAGAAAAATATAAAATACATACAGAAAGACATGAGAGCAAGGGACGGGGCAGGGCAAGATCATG
AAAATTGTGATGTAAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-E2 [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIINDQKISRGNGHFISIMVNNYRT
HCGVVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVYFSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS

Sequences:

>Translated_160_residues
MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIINDQKISRGNGHFISIMVNNYRT
HCGVVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVYFSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS
>Mature_160_residues
MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIINDQKISRGNGHFISIMVNNYRT
HCGVVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVYFSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787729, Length=160, Percent_Identity=99.375, Blast_Score=318, Evalue=1e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18934; Mature: 18934

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIIND
CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECC
QKISRGNGHFISIMVNNYRTHCGVVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVY
CEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
FSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS
EECCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIIND
CCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECC
QKISRGNGHFISIMVNNYRTHCGVVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVY
CEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
FSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS
EECCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 9097039; 9278503 [H]