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The map label for this gene is yncM

Identifier: 218693701

GI number: 218693701

Start: 270508

End: 270708

Strand: Direct

Name: yncM

Synonym: EC55989_0241

Alternate gene names: 218693701

Gene position: 270508-270708 (Clockwise)

Preceding gene: 218693700

Following gene: 218693702

Centisome position: 5.25

GC content: 40.8

Gene sequence:

>201_bases
TTGTCATTCAGGCAGAAGAAAGAAGATAAATCAGCAGAAGGTGTAAGCATCCGATATTATATTTCATCAAAGGATATGGA
TGCTAAAGAATTTGCACATGCTATCAGAGCGCACTGGCTGATCGAGCACAGTCTTCATTGGGTGTTAGATGTAAAAATGA
ATGAAGATGCCAGCCGGATAAGAAGAGGAAACGCAGCCTAA

Upstream 100 bases:

>100_bases
GGAAGAAAAGAAACACGTTTGCATATTGTCAGTAACGTAACGCCTGAACTTTTGTGATTTTGAATTCGAATGGAAGGGAT
TAAAAAAGCTTTGTGTAGCA

Downstream 100 bases:

>100_bases
ATAATATCTGGAATAAAGAAGATGGCACTGAATTTATTAAGAGATTGCAAAGACATTAAGGGTGAAGAGGAAAAGAAAGA
AGGCTGCGTTAAACACAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAA

Sequences:

>Translated_66_residues
MSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAA
>Mature_65_residues
SFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAA

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1789896, Length=71, Percent_Identity=56.3380281690141, Blast_Score=76, Evalue=3e-16,
Organism=Escherichia coli, GI1787733, Length=67, Percent_Identity=56.7164179104478, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 7732; Mature: 7601

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRI
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHH
RRGNAA
CCCCCC
>Mature Secondary Structure 
SFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRI
CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHH
RRGNAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]