| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is nanM1 [H]
Identifier: 218692468
GI number: 218692468
Start: 4873936
End: 4875054
Strand: Direct
Name: nanM1 [H]
Synonym: ECED1_4916
Alternate gene names: 218692468
Gene position: 4873936-4875054 (Clockwise)
Preceding gene: 218692467
Following gene: 218692469
Centisome position: 93.56
GC content: 39.95
Gene sequence:
>1119_bases GTGATTACAATGAAAGTGAAAAACTTTATATATCTTCCCTTCTGCTTGTTTATTGGAACGTCGGTAGCCGGAGCTTTACC GGAAATTCCTGAACCATTTAAATATGGTGTAGGAGGGATCGAGAATGGTAAAATATATATAGGACTGGGAAGTCTGGGAA ATAACTGGTATATGATAGATACAAACCAGAGTGAAAAAAAATGGACTAAGATAGCACAATGGCCGACAGTTCCCAGAGAG CAGGCAACAGCTACTATTATTGATGGTAAGATCTATGTATTTGGAGGAATTGGAAAAGATAAAAGTGGAGTCATAACCTT ACAAAAAGATGTCTATTCCTATGATATTGCTAAAGATAAATGGGAAAAATTGATGACCCGTCCCCCTGTATCTCTTGCCG GTCATGTTTCTTTTATCCATAATGGTCATGCGGTATCTACTGGTGGTGTAAATGAGAATATTTTTAATGGATACTTTTCA GATGTCGAGTTATCAAAAGGGAATTCCGCGCTGACAGAGAAAGTCAACAGGGATTATTTTAGTAAACCTGCTGATGATTA TTTTTTAAATAATCATATAATTTCTTATGACCCGTCAAAAAACCAGTGGAAGAACCTGGGAACGACTCCATTTCCGGGAA CTGCTGGTTCATCGGTGATTTTTGCAGAACAGCAAATTTATATACTGGGAGGGGAGAGAAAACCGGGGCTTCGTTCTGTT AGATCCTGGACGGGGGAGCTTTCGCATGATCGAATTAAATGGTCTGAACTTCCACCAGTAGCTTCACCCGAGGGGGTGTC AGGAGCATATGCCTCTGTTATTGATGGAAATATCTTTCTGGCCGGTGGTGCATATTTCCCGGGGGCGGCAGAAAAGTATA GCAATGGTGAATACTGGTCTCATAAAGGACTGGATAAAGCCTATTCAAAAGAGATATATCAGCTAATAAAAAATGACTGG AAAAAAGTTGGTTCTTTGCCGGAAGGACTTGCTTATGGTGTAAGCCTGCCCTGGCAGGGGGGGATGCTCATTCTGGGTGG GGAGAAAAAAGATGGTAAAGCTGTTTCAGATGTTATTTATCTGAAAAAAAATGACAAACAAATAAAGATTGTTAAATAA
Upstream 100 bases:
>100_bases TATAGAATATGATTACCTGGATAAACAAGGGGTGTATAAGGGGAAAGATAATAAACATGAAAATAGTTACCGTGTCGGTG TTCTGATTAATTTTTAAAAG
Downstream 100 bases:
>100_bases CTGTAATGCAGGTGACTGTATTAGTTGTTCAGTCACCTGAGTTATTTTAATGGGGTTTATAATGAATAAAGATAAATCTT TAAATGAAATGATGTTAAGC
Product: N-acetylneuraminic acid mutarotase
Products: NA
Alternate protein names: N-acetylneuraminate mutarotase 1; Neu5Ac mutarotase 1; Sialic acid epimerase 1 [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MITMKVKNFIYLPFCLFIGTSVAGALPEIPEPFKYGVGGIENGKIYIGLGSLGNNWYMIDTNQSEKKWTKIAQWPTVPRE QATATIIDGKIYVFGGIGKDKSGVITLQKDVYSYDIAKDKWEKLMTRPPVSLAGHVSFIHNGHAVSTGGVNENIFNGYFS DVELSKGNSALTEKVNRDYFSKPADDYFLNNHIISYDPSKNQWKNLGTTPFPGTAGSSVIFAEQQIYILGGERKPGLRSV RSWTGELSHDRIKWSELPPVASPEGVSGAYASVIDGNIFLAGGAYFPGAAEKYSNGEYWSHKGLDKAYSKEIYQLIKNDW KKVGSLPEGLAYGVSLPWQGGMLILGGEKKDGKAVSDVIYLKKNDKQIKIVK
Sequences:
>Translated_372_residues MITMKVKNFIYLPFCLFIGTSVAGALPEIPEPFKYGVGGIENGKIYIGLGSLGNNWYMIDTNQSEKKWTKIAQWPTVPRE QATATIIDGKIYVFGGIGKDKSGVITLQKDVYSYDIAKDKWEKLMTRPPVSLAGHVSFIHNGHAVSTGGVNENIFNGYFS DVELSKGNSALTEKVNRDYFSKPADDYFLNNHIISYDPSKNQWKNLGTTPFPGTAGSSVIFAEQQIYILGGERKPGLRSV RSWTGELSHDRIKWSELPPVASPEGVSGAYASVIDGNIFLAGGAYFPGAAEKYSNGEYWSHKGLDKAYSKEIYQLIKNDW KKVGSLPEGLAYGVSLPWQGGMLILGGEKKDGKAVSDVIYLKKNDKQIKIVK >Mature_372_residues MITMKVKNFIYLPFCLFIGTSVAGALPEIPEPFKYGVGGIENGKIYIGLGSLGNNWYMIDTNQSEKKWTKIAQWPTVPRE QATATIIDGKIYVFGGIGKDKSGVITLQKDVYSYDIAKDKWEKLMTRPPVSLAGHVSFIHNGHAVSTGGVNENIFNGYFS DVELSKGNSALTEKVNRDYFSKPADDYFLNNHIISYDPSKNQWKNLGTTPFPGTAGSSVIFAEQQIYILGGERKPGLRSV RSWTGELSHDRIKWSELPPVASPEGVSGAYASVIDGNIFLAGGAYFPGAAEKYSNGEYWSHKGLDKAYSKEIYQLIKNDW KKVGSLPEGLAYGVSLPWQGGMLILGGEKKDGKAVSDVIYLKKNDKQIKIVK
Specific function: Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, whic
COG id: COG3055
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 7 Kelch repeats [H]
Homologues:
Organism=Escherichia coli, GI87082419, Length=364, Percent_Identity=44.2307692307692, Blast_Score=343, Evalue=1e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015915 - InterPro: IPR006652 - InterPro: IPR019936 [H]
Pfam domain/function: PF01344 Kelch_1 [H]
EC number: NA
Molecular weight: Translated: 40989; Mature: 40989
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITMKVKNFIYLPFCLFIGTSVAGALPEIPEPFKYGVGGIENGKIYIGLGSLGNNWYMID CEEEEECCEEHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEE TNQSEKKWTKIAQWPTVPREQATATIIDGKIYVFGGIGKDKSGVITLQKDVYSYDIAKDK CCCCHHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCHHHHCHHHH WEKLMTRPPVSLAGHVSFIHNGHAVSTGGVNENIFNGYFSDVELSKGNSALTEKVNRDYF HHHHHCCCCCCCEEEEEEEECCEEEECCCCCCHHHCCCCCCEEECCCCHHHHHHHHHHHH SKPADDYFLNNHIISYDPSKNQWKNLGTTPFPGTAGSSVIFAEQQIYILGGERKPGLRSV CCCCCCEEECCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHH RSWTGELSHDRIKWSELPPVASPEGVSGAYASVIDGNIFLAGGAYFPGAAEKYSNGEYWS HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCHHHCCCCCCCC HKGLDKAYSKEIYQLIKNDWKKVGSLPEGLAYGVSLPWQGGMLILGGEKKDGKAVSDVIY CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEECCCCCCCCEEEEEEE LKKNDKQIKIVK EECCCCEEEEEC >Mature Secondary Structure MITMKVKNFIYLPFCLFIGTSVAGALPEIPEPFKYGVGGIENGKIYIGLGSLGNNWYMID CEEEEECCEEHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEE TNQSEKKWTKIAQWPTVPREQATATIIDGKIYVFGGIGKDKSGVITLQKDVYSYDIAKDK CCCCHHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCHHHHCHHHH WEKLMTRPPVSLAGHVSFIHNGHAVSTGGVNENIFNGYFSDVELSKGNSALTEKVNRDYF HHHHHCCCCCCCEEEEEEEECCEEEECCCCCCHHHCCCCCCEEECCCCHHHHHHHHHHHH SKPADDYFLNNHIISYDPSKNQWKNLGTTPFPGTAGSSVIFAEQQIYILGGERKPGLRSV CCCCCCEEECCEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHH RSWTGELSHDRIKWSELPPVASPEGVSGAYASVIDGNIFLAGGAYFPGAAEKYSNGEYWS HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCHHHCCCCCCCC HKGLDKAYSKEIYQLIKNDWKKVGSLPEGLAYGVSLPWQGGMLILGGEKKDGKAVSDVIY CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEECCCCCCCCEEEEEEE LKKNDKQIKIVK EECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]