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The map label for this gene is yjdA [H]

Identifier: 218692405

GI number: 218692405

Start: 4803908

End: 4806136

Strand: Direct

Name: yjdA [H]

Synonym: ECED1_4843

Alternate gene names: 218692405

Gene position: 4803908-4806136 (Clockwise)

Preceding gene: 218692388

Following gene: 218692406

Centisome position: 92.21

GC content: 51.01

Gene sequence:

>2229_bases
ATGTACACACAGACCCTGTATGAGTTAAGTCAGGAGGCTGAACGCCTGTTACAGCTTTCTCGCCAACAGTTGCAGTTACT
GGAAAAAATACCTCTCTCTGTACCCGGAGACGATGCGTCACAACTGGCTTTACCCTGGAGTCAGCCTAATATCGCCGAAC
GTCACGCGATGCTGAATAATGAGTTGCGTAAAATTTCCCGGCTGGAAATGGTGCTGGCGATTGTCGGTACCATGAAAGCA
GGGAAATCAACCACCATTAATGCCATTGTTGGTACGGAGGTTCTGCCTAATCGCAATCGCCCAATGACTGCGCTGCCAAC
GCTTATTCGCCATACGCCCGGGCAAAAAGAACCGGTACTGCATTTTTCACATGTCGCGCCAATCGACCATTTAATTCAAC
AATTACAACAGCGCCTGCGTGATTGCGATATTAAGCATCTGACCGATGTGCTGGAAATAGATAAAGATATGCGTGCGCTT
ATGCAGCGGATCGAAAATGGCATCGCTTTCGAAAAATATTATCTGGGTGCTCAACCTATTTTTCATTGTCTGAAAAGTTT
GAATGATTTGGTGCGACTGGCGAAGGCGCTGGACGTCGATTTTCCTTTTTCTGCTTACGCCGCCATTGAGCATATTCCCG
TGATTGAAGTGGAGTTTGTCCATCTGGCGGGGCTGGAGAGTTATCCCGGTCAGTTGACGTTACTGGATACCCCCGGGCCA
AATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGA
TTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCAATTTTGGCGGTGGGGCAATCGGTGCCGTTGTATG
TGCTGGTCAATAAGTTCGATCAACAGGATCGTAACAGTGACGACGCCGACCAGGTGCGGGCACTGATTTCCGGAACGCTG
ATGAAAGGCTGTATTACGCCACAGCAGATATTTCCGGTGTCGTCGATGTGGGGCTACCTGGCGAATCGGGCGCGCCATGA
GTTAGCCAACAACGGTAAGTTACCCGCGCCAGAGCAACAACGCTGGGTGGAAGATTTTGCCCATGCCGCGCTCGGCAGGC
GCTGGCGTCATGCCGATCTGGCGGACTTCGAACATATTCGCCATGCTGCCGATCAGTTGTGGGAAGATTCGCTGTTCGCC
CAGCCAATTCAGGCGTTGCTTTATGCCGCTTACGCTAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTT
GAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGATCAATTGCAGCAAA
ATATCCATCAGGTCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATC
GAGTTGGCCCTGACCTCCACCAACCACTTTCTGCGTCAACAGCAAGATGCGGTGAATGCGCAGTTAGCCGCGTTGTTTCA
GGATAATTCGGAGTCGTTAAGTGAGATGCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTCGCG
ACTTTACGCTGCGCTTTGCCGAGCTTGAGTCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAA
GTCAAAATGGAATTGAGTGAGTCTGGGTTTCGTCCTGGGTTTCATTTTCCTGTTTTTCACGGCGTAGTTCCCCACTTCAA
CACCCGCCAGCTGTTCAGTGAAGTCATTTCGCGCCAGGCAGCAACGGACGAGCAGAGCACGCGTTTAGGCGTTGTGCGTG
AGATTTTTTCGCGCTGGTTGAATCAGCCCGACTGGGGACGGGGAAATGAGAAATTCCCGACAGAGACGGTTGATTACAGT
GTGTTGCAACGAGCATTAAGCGCAGAAGTCGATCTTTATTGCCAACAAATGGCTAAAGTTATGGCAGAGCAGGTCGATGA
ATCTGTTACGGCAGGCATGAATACTTTTTTCGCTGAGTTCGCTTCATGTTTGACGGAATTACAGACGCGTTTACGCGAAA
GTATGGCTCTGCGTCAACAAAATGAATCGGTGGTCAGGCTGATGCAACAGCAATTGCAGCAGACTGTGATGACTCACGGC
TGGATTTACACCGACGCTCAGCTGTTACGCGATGATATTCAAACACTTTTCACGGCAGAACGATATTGA

Upstream 100 bases:

>100_bases
TAAAATTATTTCTTGCAGTTATTATAAAAGCCGAAAACAGAACTCAAAAACAATCTGGCTAAATAAAAGTAATAAAATTT
GCTTTAAGGAAGAATTTTCT

Downstream 100 bases:

>100_bases
CCAAGACGTTACTGGACGGCCCCGGTCGCGTGCTGGAGTCGGTTCATCCGCGCTTTTTAGTGGATCTGGCGCAGGGCGAT
GATGCCCGCCTTCCACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 742; Mature: 742

Protein sequence:

>742_residues
MYTQTLYELSQEAERLLQLSRQQLQLLEKIPLSVPGDDASQLALPWSQPNIAERHAMLNNELRKISRLEMVLAIVGTMKA
GKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDHLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
MQRIENGIAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP
NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTL
MKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADFEHIRHAADQLWEDSLFA
QPIQALLYAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACDQLQQNIHQVEESLQLLQLNQAQVSGEIKHEI
ELALTSTNHFLRQQQDAVNAQLAALFQDNSESLSEMRTRCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQ
VKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQAATDEQSTRLGVVREIFSRWLNQPDWGRGNEKFPTETVDYS
VLQRALSAEVDLYCQQMAKVMAEQVDESVTAGMNTFFAEFASCLTELQTRLRESMALRQQNESVVRLMQQQLQQTVMTHG
WIYTDAQLLRDDIQTLFTAERY

Sequences:

>Translated_742_residues
MYTQTLYELSQEAERLLQLSRQQLQLLEKIPLSVPGDDASQLALPWSQPNIAERHAMLNNELRKISRLEMVLAIVGTMKA
GKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDHLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
MQRIENGIAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP
NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTL
MKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADFEHIRHAADQLWEDSLFA
QPIQALLYAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACDQLQQNIHQVEESLQLLQLNQAQVSGEIKHEI
ELALTSTNHFLRQQQDAVNAQLAALFQDNSESLSEMRTRCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQ
VKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQAATDEQSTRLGVVREIFSRWLNQPDWGRGNEKFPTETVDYS
VLQRALSAEVDLYCQQMAKVMAEQVDESVTAGMNTFFAEFASCLTELQTRLRESMALRQQNESVVRLMQQQLQQTVMTHG
WIYTDAQLLRDDIQTLFTAERY
>Mature_742_residues
MYTQTLYELSQEAERLLQLSRQQLQLLEKIPLSVPGDDASQLALPWSQPNIAERHAMLNNELRKISRLEMVLAIVGTMKA
GKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDHLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
MQRIENGIAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP
NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTL
MKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADFEHIRHAADQLWEDSLFA
QPIQALLYAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACDQLQQNIHQVEESLQLLQLNQAQVSGEIKHEI
ELALTSTNHFLRQQQDAVNAQLAALFQDNSESLSEMRTRCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQ
VKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQAATDEQSTRLGVVREIFSRWLNQPDWGRGNEKFPTETVDYS
VLQRALSAEVDLYCQQMAKVMAEQVDESVTAGMNTFFAEFASCLTELQTRLRESMALRQQNESVVRLMQQQLQQTVMTHG
WIYTDAQLLRDDIQTLFTAERY

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790548, Length=742, Percent_Identity=96.900269541779, Blast_Score=1436, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 84375; Mature: 84375

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTQTLYELSQEAERLLQLSRQQLQLLEKIPLSVPGDDASQLALPWSQPNIAERHAMLNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHHHHH
ELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVL
HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
HFSHVAPIDHLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGIAFEKYYLGAQPI
HHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH
FHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEHHHHHCCCCCCCCEEEEECCCC
NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
QQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQ
HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RWVEDFAHAALGRRWRHADLADFEHIRHAADQLWEDSLFAQPIQALLYAAYANASLYALR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
SAAHKLLNYAQQAREYLDFRAHGLNVACDQLQQNIHQVEESLQLLQLNQAQVSGEIKHEI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELALTSTNHFLRQQQDAVNAQLAALFQDNSESLSEMRTRCETLLQTAQNTISRDFTLRFA
EEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELESTLCRVLTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
ATDEQSTRLGVVREIFSRWLNQPDWGRGNEKFPTETVDYSVLQRALSAEVDLYCQQMAKV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MAEQVDESVTAGMNTFFAEFASCLTELQTRLRESMALRQQNESVVRLMQQQLQQTVMTHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
WIYTDAQLLRDDIQTLFTAERY
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYTQTLYELSQEAERLLQLSRQQLQLLEKIPLSVPGDDASQLALPWSQPNIAERHAMLNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHHHHH
ELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVL
HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
HFSHVAPIDHLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGIAFEKYYLGAQPI
HHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH
FHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEHHHHHCCCCCCCCEEEEECCCC
NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
QQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQ
HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RWVEDFAHAALGRRWRHADLADFEHIRHAADQLWEDSLFAQPIQALLYAAYANASLYALR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
SAAHKLLNYAQQAREYLDFRAHGLNVACDQLQQNIHQVEESLQLLQLNQAQVSGEIKHEI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELALTSTNHFLRQQQDAVNAQLAALFQDNSESLSEMRTRCETLLQTAQNTISRDFTLRFA
EEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELESTLCRVLTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
ATDEQSTRLGVVREIFSRWLNQPDWGRGNEKFPTETVDYSVLQRALSAEVDLYCQQMAKV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MAEQVDESVTAGMNTFFAEFASCLTELQTRLRESMALRQQNESVVRLMQQQLQQTVMTHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
WIYTDAQLLRDDIQTLFTAERY
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 7610040; 9278503 [H]