| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yjcZ [H]
Identifier: 218692406
GI number: 218692406
Start: 4806133
End: 4807011
Strand: Direct
Name: yjcZ [H]
Synonym: ECED1_4844
Alternate gene names: 218692406
Gene position: 4806133-4807011 (Clockwise)
Preceding gene: 218692405
Following gene: 218692407
Centisome position: 92.26
GC content: 57.0
Gene sequence:
>879_bases TTGACCAAGACGTTACTGGACGGCCCCGGTCGCGTGCTGGAGTCGGTTCATCCGCGCTTTTTAGTGGATCTGGCGCAGGG CGATGATGCCCGCCTTCCACAAGCCCATCAGCAGCAGTTTCGTGAACGACTGATGCAGGAACTTCTTGCGCGCGTGCAGC TTCAGACATGGACGAACGGCGGCATGTTAAATGCGCCGCTTAGTCTGCGTCTGACATTGGTGGAGAAACTGGCGTCGATG CTGGATCCCGGTCATCTGGCGCTGACGCAGATCGCGCAGCATCTGGCGCTGCTGCAAAAAATGGATCACCGCCAGCACTC TGCTTTCCCGGAGCTCCCCCAGCAAATTGTCGCCTTGTATGAGTGGTTTTCAGCCCGTTGTCGCTGGAAGGAAAAGGCGT TAACGCAACGAGGCCTATTGGTGCAGGCGGGTGAACAGAGCGAGCAAATTTTTACCCGCTGGCGTGCTGGGGCGTATAAC GCCTGGTCGTTGCCTGGGCGCTGCTTTATCGTTCTGGAGGAGTTGCGCTGGGGTGCATTTGGCGATGCCTGCCGTCTGGG AAGCCCGCAAGCGGTGGCGTTGTTGCTGGGTGATTTGCGCGTGAAAGCGACACAACATTTGGCAGAGAGTATCAATGCGG CCCCGACCACGCGTCACTATTACCATCAGTGGTTTGCCTCTTCGACCGTTTCGACGGGCGGGGATCATGCTGATTTTTTA AGTTGGCTGGGAAAGTGGTCTACGGCAGATAAACAACCCGTTTGCTGGTCAGTGACCCAACGCTGGCGAACTGTCGCACT GGGGATGCCACGACTCTGTTCAGCGCAGCGTCTGGCAGGGGCAATGGTCGAGGAAATCTTCTCTGTAAATTTGGTGTAA
Upstream 100 bases:
>100_bases AACAGCAATTGCAGCAGACTGTGATGACTCACGGCTGGATTTACACCGACGCTCAGCTGTTACGCGATGATATTCAAACA CTTTTCACGGCAGAACGATA
Downstream 100 bases:
>100_bases ATAATCAGTTACACCAATGAGTCCTAAACGAAATGCATGTGTGAAGTTGATCACAAATTTAAACACTGGTAGGGTAAAAA GGTCATTAACTGCCCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTKTLLDGPGRVLESVHPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRLTLVEKLASM LDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIVALYEWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYN AWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVSTGGDHADFL SWLGKWSTADKQPVCWSVTQRWRTVALGMPRLCSAQRLAGAMVEEIFSVNLV
Sequences:
>Translated_292_residues MTKTLLDGPGRVLESVHPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRLTLVEKLASM LDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIVALYEWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYN AWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVSTGGDHADFL SWLGKWSTADKQPVCWSVTQRWRTVALGMPRLCSAQRLAGAMVEEIFSVNLV >Mature_291_residues TKTLLDGPGRVLESVHPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNGGMLNAPLSLRLTLVEKLASML DPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIVALYEWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYNA WSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVSTGGDHADFLS WLGKWSTADKQPVCWSVTQRWRTVALGMPRLCSAQRLAGAMVEEIFSVNLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082371, Length=291, Percent_Identity=96.2199312714777, Blast_Score=576, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32916; Mature: 32785
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTLLDGPGRVLESVHPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNG CCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIVALY CEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAF HHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCC GDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVSTGGDHADFL CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH SWLGKWSTADKQPVCWSVTQRWRTVALGMPRLCSAQRLAGAMVEEIFSVNLV HHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKTLLDGPGRVLESVHPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNG CCCCCCCCHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIVALY CEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAF HHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCC GDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVSTGGDHADFL CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH SWLGKWSTADKQPVCWSVTQRWRTVALGMPRLCSAQRLAGAMVEEIFSVNLV HHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]