Click here to switch to the map view.

The map label for this gene is yjdP [H]

Identifier: 218692388

GI number: 218692388

Start: 4791265

End: 4791594

Strand: Direct

Name: yjdP [H]

Synonym: ECED1_4826

Alternate gene names: 218692388

Gene position: 4791265-4791594 (Clockwise)

Preceding gene: 218692387

Following gene: 218692405

Centisome position: 91.97

GC content: 56.06

Gene sequence:

>330_bases
ATGAAACGCTTTCCGCTATTTCTTTTATTCACCCCGCTCACGCTGTCCACCGTTCCGGCCCAGGCCGATATTATCGACGA
CACCATTGGCAATATTCAGCAGGCGATTAACGACGCTTATAACCCTGACCGTGGGCGAGACTATGAAGATTCGCGCGACG
ACGGCTGGCAGCGTGAAGTGAGCGACGATCGGCGCAGACAATATGATGACCGCCGCCGCCAGTTTGAAGATCGCCGCAGG
CAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAAGATGAAGAGCGGAGAATGGAAGATGAGTA
TGGGCGTTGA

Upstream 100 bases:

>100_bases
CGATTACGGCAATAGAGCAGCAAAGGAATTGAGATTCATCCACTACTTGCATGGATGAGTAATGACTAATGTGGATAGAG
TTTCTTTTTGAGGTTGGCTA

Downstream 100 bases:

>100_bases
GGTAGGGGCCGGCGCGGGTATTTTCCCTCACTCCACCTCAATCTCCATCCCATCAAATCCCGCCTCAAACCCCGACGGCA
GTGCGTTTTCCATCAGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKRFPLFLLFTPLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRR
QLDDRQRQLDQERRQLEDEERRMEDEYGR

Sequences:

>Translated_109_residues
MKRFPLFLLFTPLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRR
QLDDRQRQLDQERRQLEDEERRMEDEYGR
>Mature_109_residues
MKRFPLFLLFTPLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRR
QLDDRQRQLDQERRQLEDEERRMEDEYGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994996, Length=109, Percent_Identity=99.0825688073395, Blast_Score=207, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13453; Mature: 13453

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFPLFLLFTPLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREV
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
SDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRFPLFLLFTPLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREV
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
SDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]