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The map label for this gene is aufE [H]

Identifier: 218691709

GI number: 218691709

Start: 4000313

End: 4000891

Strand: Reverse

Name: aufE [H]

Synonym: ECED1_4094

Alternate gene names: 218691709

Gene position: 4000891-4000313 (Counterclockwise)

Preceding gene: 218691710

Following gene: 218691708

Centisome position: 76.8

GC content: 36.1

Gene sequence:

>579_bases
ATGTACATGCCGGGCAAGCAAATGCTCTGTTGTATTTTGATATCGATTATCAGTGAGGGAGATATGAAGATATTCATTAG
TTTATTTTTGTTTATAATATCAACAAGTTCTTTTGCTGATGATATCACTCATGCCGGAGTAGTTCGTATTGAAGGGTTAA
TTACCGAAAAAACCTGCATTATTTCTGATGAGTCAAAAAATTTTACAGTTAATATGCCAGACGTACCCAGTAGTTCGGTA
AGGAGTGCAGGAGACGTTACTGAAAAGGTTTATTTTTCCATAACGTTAACCCGCTGTGGTAGTGATGTTGGCAACGCTTA
TATAAAGTTTACCGGTAATACAGTTTCAGAAGATGCCAGTTTATATAAGCTGGAAGAAGGCTCGGTAGAGGGGCTTGCAC
TCACGATTTTTGATAAGAATAAAGGTAGTATTAGTAATGATGTTAAAAGCATCGTTTTTTCACTTACACCATCAGTTGAT
AATATATTGCATTTTTTTGCGGCTTACAAAGCATTAAAAAATAATGTCCAACCAGGGGATGCCAATGCGTCAGTATCGTT
TATTGTCACCTATGATTAA

Upstream 100 bases:

>100_bases
ATTGCCATTAATGGTGAATCAGGTTTTCGTGATTTAGTGTTAAATGAAAACGGTGATGCTAATTTGACGTTTAAACTTCG
CTATAAATCAACTCAGGAAA

Downstream 100 bases:

>100_bases
GGTAGTCATAGTATTATTTTCCCTTTTATTCTCTACAGCACAAGCAGGCTTAGTGATCGGTGGAACGCGTTTTGCGTATC
CGGAAAATCAGTCCTCAATA

Product: putative minor fimbrial subunit AufE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MYMPGKQMLCCILISIISEGDMKIFISLFLFIISTSSFADDITHAGVVRIEGLITEKTCIISDESKNFTVNMPDVPSSSV
RSAGDVTEKVYFSITLTRCGSDVGNAYIKFTGNTVSEDASLYKLEEGSVEGLALTIFDKNKGSISNDVKSIVFSLTPSVD
NILHFFAAYKALKNNVQPGDANASVSFIVTYD

Sequences:

>Translated_192_residues
MYMPGKQMLCCILISIISEGDMKIFISLFLFIISTSSFADDITHAGVVRIEGLITEKTCIISDESKNFTVNMPDVPSSSV
RSAGDVTEKVYFSITLTRCGSDVGNAYIKFTGNTVSEDASLYKLEEGSVEGLALTIFDKNKGSISNDVKSIVFSLTPSVD
NILHFFAAYKALKNNVQPGDANASVSFIVTYD
>Mature_192_residues
MYMPGKQMLCCILISIISEGDMKIFISLFLFIISTSSFADDITHAGVVRIEGLITEKTCIISDESKNFTVNMPDVPSSSV
RSAGDVTEKVYFSITLTRCGSDVGNAYIKFTGNTVSEDASLYKLEEGSVEGLALTIFDKNKGSISNDVKSIVFSLTPSVD
NILHFFAAYKALKNNVQPGDANASVSFIVTYD

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787781, Length=174, Percent_Identity=29.8850574712644, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI1790773, Length=169, Percent_Identity=29.585798816568, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI87081805, Length=169, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786746, Length=172, Percent_Identity=26.1627906976744, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20845; Mature: 20845

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMPGKQMLCCILISIISEGDMKIFISLFLFIISTSSFADDITHAGVVRIEGLITEKTCI
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEEEECCEEE
ISDESKNFTVNMPDVPSSSVRSAGDVTEKVYFSITLTRCGSDVGNAYIKFTGNTVSEDAS
EECCCCCEEEECCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCE
LYKLEEGSVEGLALTIFDKNKGSISNDVKSIVFSLTPSVDNILHFFAAYKALKNNVQPGD
EEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
ANASVSFIVTYD
CCCEEEEEEEEC
>Mature Secondary Structure
MYMPGKQMLCCILISIISEGDMKIFISLFLFIISTSSFADDITHAGVVRIEGLITEKTCI
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEEEECCEEE
ISDESKNFTVNMPDVPSSSVRSAGDVTEKVYFSITLTRCGSDVGNAYIKFTGNTVSEDAS
EECCCCCEEEECCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCE
LYKLEEGSVEGLALTIFDKNKGSISNDVKSIVFSLTPSVDNILHFFAAYKALKNNVQPGD
EEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
ANASVSFIVTYD
CCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]