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The map label for this gene is yoaB [C]

Identifier: 218548519

GI number: 218548519

Start: 1187798

End: 1188169

Strand: Reverse

Name: yoaB [C]

Synonym: EFER_1148

Alternate gene names: 218548519

Gene position: 1188169-1187798 (Counterclockwise)

Preceding gene: 218548520

Following gene: 218548518

Centisome position: 25.89

GC content: 49.46

Gene sequence:

>372_bases
ATGGAGCCAATCAGCTTGAATATCAAACGTAATAACCCACAACCTCGTCTTGCCGCCAGTGTGGAATATGGCAATCTTGT
ATTTCTCTCCGGCCAGACACCGAAGAGCAATACTCCTGACATCGCGCAACAAACGCGCGAAGTGCTGGAGAAAATCGACG
CATTACTTGCTGAAGCTGGTAGTGATAAATTTCATCTCTTGTCCGCTCAGGTATGGTTAAAAGATATCAGCCGCAATTTT
GCCGATTTCAACGACGTATGGGTTAACTGGATGCCAGAAGGATATAGCCCGGCACGTGCTGCCGTGCAGGCTGAGATGGC
CCGCCCGGAGATTCTGGTTGAAGTGATGGTCACTGCGGTAAAAGCGGGATAA

Upstream 100 bases:

>100_bases
GCCAGGGCAGTCTGGGCTTCACCTTAGCGGCAGGTAGTGCCGTGGTGTTAGGCGCTCTACTGTCGGGCGAAGATCCCGTA
ATTTCCCTTGATGGACTGAC

Downstream 100 bases:

>100_bases
TCCCCCATTGTCAGCCCCCTGCCAACATCGTCATGGGGCTTAAACGCCCCCTCTTTTACCTGCCAACATTCAGGCTGAAA
ATATCATTTTTAGTTATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MEPISLNIKRNNPQPRLAASVEYGNLVFLSGQTPKSNTPDIAQQTREVLEKIDALLAEAGSDKFHLLSAQVWLKDISRNF
ADFNDVWVNWMPEGYSPARAAVQAEMARPEILVEVMVTAVKAG

Sequences:

>Translated_123_residues
MEPISLNIKRNNPQPRLAASVEYGNLVFLSGQTPKSNTPDIAQQTREVLEKIDALLAEAGSDKFHLLSAQVWLKDISRNF
ADFNDVWVNWMPEGYSPARAAVQAEMARPEILVEVMVTAVKAG
>Mature_123_residues
MEPISLNIKRNNPQPRLAASVEYGNLVFLSGQTPKSNTPDIAQQTREVLEKIDALLAEAGSDKFHLLSAQVWLKDISRNF
ADFNDVWVNWMPEGYSPARAAVQAEMARPEILVEVMVTAVKAG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=32.4561403508772, Blast_Score=66, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13638; Mature: 13638

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPISLNIKRNNPQPRLAASVEYGNLVFLSGQTPKSNTPDIAQQTREVLEKIDALLAEAG
CCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SDKFHLLSAQVWLKDISRNFADFNDVWVNWMPEGYSPARAAVQAEMARPEILVEVMVTAV
CCCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
KAG
CCC
>Mature Secondary Structure
MEPISLNIKRNNPQPRLAASVEYGNLVFLSGQTPKSNTPDIAQQTREVLEKIDALLAEAG
CCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SDKFHLLSAQVWLKDISRNFADFNDVWVNWMPEGYSPARAAVQAEMARPEILVEVMVTAV
CCCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
KAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]