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The map label for this gene is dadA [H]

Identifier: 218548520

GI number: 218548520

Start: 1188151

End: 1189404

Strand: Reverse

Name: dadA [H]

Synonym: EFER_1149

Alternate gene names: 218548520

Gene position: 1189404-1188151 (Counterclockwise)

Preceding gene: 218548521

Following gene: 218548519

Centisome position: 25.92

GC content: 50.16

Gene sequence:

>1254_bases
ATGAAAAAACGCATTGTAGTTATTGGCGGCGGGGTAATTGGTCTGGCAACAGCATGGGTGCTGGTAAAACAGGGCCATCA
GGTGCAATTGTTAGAACGCAACAGCCAGGCAGGTGTCGCCACCAGTTTCGCTAACGGAGGGCAACTCAGTTATCGCTACG
TTGCTCCTCTGGCGGATAAAGGCGTACCGATGCAGGGGCTTAAATGGATGGGGAAAAGCAGCTCTCCCCTGAATATGCGT
TTGCGCATGTCATTTAGCCAGTGGCGCTGGTTGCTGGAATTTTTACTGGCCTGCAATAGCCGGACAAATAAACTCAATGG
CGATCATATTTTACGTTTATCACTGTTAAGTCGTCAGGTCATGGAAGAGTGGCTGCTGGAAGATAATCTTGATGATTTTC
ACTGGCGCCGTTCTGGCAAACTGATTATTCATCGCCGCCCGCAAGATTTAGCCAAAGCAGCAAAAGGCATTAATCCGCAA
TTTCAACAGGCGTTATCACGCGAAGAGTGCGTTCATCTGGAACCAGCACTAAAACATATTAGTCATTCATTGTGTGGCGG
TATTTATTCCCCCGGCGATGAAACGGCGGACTGCTATAAGTTCTGCCAGGCATTACTTGCCAAACTTAATGCCAGCGCAA
ACTTTTCGCTACAGACCGATTGTGAAGTTTTGCAGTTGAATAAAAAAGGCGAGCGCATTGATTCCCTTACCACCAGCACA
GGAACACTGGTTGCTGATGATTATGTCGTTGCCGCGGGTAATGGCAGTAAGCATTTACTTGCCGGAACCGGGACTCACGT
ACCGCTCTGCGGTCTGAAAGGTTACAGTCTGACGCTCCCCTTTCCACAAGAAATGGGGATCGCACCGCAAATCAGTGTCA
CCGACTATGGTCATAAAATTGTCTATGCCCGCCTCGGTGACCGGTTGCGTATCGCCGCTATGGTCGATATTGGCTATGAC
GGTAATGAACTGCGCCCTGAACGAATCAATGCGTTAAAGCAGATCGTCGCTAACAGCTTTCCGCAACTGCAAGGCATCAA
TGATGCCGAATTATGGACAGGTATGCGTCCATCCACCCCTGCGGGTCCGCCACTGTTAGGACGGGCGAAGTATCAAAATC
TGTGGATGAATCTTGGCCAGGGCAGTCTGGGCTTCACCTTAGCGGCAGGTAGTGCCGTGGTGTTAGGCGCTCTACTGTCG
GGCGAAGATCCCGTAATTTCCCTTGATGGACTGACATGGAGCCAATCAGCTTGA

Upstream 100 bases:

>100_bases
ACCTTGAGTTATACCCTGAAAATAAAAAGTCAATTGCTCCTCAGGCCTAAATGTTTTGACATAACCCCAACGCATTTATT
AGCGGTGGATATCTCAAGTA

Downstream 100 bases:

>100_bases
ATATCAAACGTAATAACCCACAACCTCGTCTTGCCGCCAGTGTGGAATATGGCAATCTTGTATTTCTCTCCGGCCAGACA
CCGAAGAGCAATACTCCTGA

Product: D-amino acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKKRIVVIGGGVIGLATAWVLVKQGHQVQLLERNSQAGVATSFANGGQLSYRYVAPLADKGVPMQGLKWMGKSSSPLNMR
LRMSFSQWRWLLEFLLACNSRTNKLNGDHILRLSLLSRQVMEEWLLEDNLDDFHWRRSGKLIIHRRPQDLAKAAKGINPQ
FQQALSREECVHLEPALKHISHSLCGGIYSPGDETADCYKFCQALLAKLNASANFSLQTDCEVLQLNKKGERIDSLTTST
GTLVADDYVVAAGNGSKHLLAGTGTHVPLCGLKGYSLTLPFPQEMGIAPQISVTDYGHKIVYARLGDRLRIAAMVDIGYD
GNELRPERINALKQIVANSFPQLQGINDAELWTGMRPSTPAGPPLLGRAKYQNLWMNLGQGSLGFTLAAGSAVVLGALLS
GEDPVISLDGLTWSQSA

Sequences:

>Translated_417_residues
MKKRIVVIGGGVIGLATAWVLVKQGHQVQLLERNSQAGVATSFANGGQLSYRYVAPLADKGVPMQGLKWMGKSSSPLNMR
LRMSFSQWRWLLEFLLACNSRTNKLNGDHILRLSLLSRQVMEEWLLEDNLDDFHWRRSGKLIIHRRPQDLAKAAKGINPQ
FQQALSREECVHLEPALKHISHSLCGGIYSPGDETADCYKFCQALLAKLNASANFSLQTDCEVLQLNKKGERIDSLTTST
GTLVADDYVVAAGNGSKHLLAGTGTHVPLCGLKGYSLTLPFPQEMGIAPQISVTDYGHKIVYARLGDRLRIAAMVDIGYD
GNELRPERINALKQIVANSFPQLQGINDAELWTGMRPSTPAGPPLLGRAKYQNLWMNLGQGSLGFTLAAGSAVVLGALLS
GEDPVISLDGLTWSQSA
>Mature_417_residues
MKKRIVVIGGGVIGLATAWVLVKQGHQVQLLERNSQAGVATSFANGGQLSYRYVAPLADKGVPMQGLKWMGKSSSPLNMR
LRMSFSQWRWLLEFLLACNSRTNKLNGDHILRLSLLSRQVMEEWLLEDNLDDFHWRRSGKLIIHRRPQDLAKAAKGINPQ
FQQALSREECVHLEPALKHISHSLCGGIYSPGDETADCYKFCQALLAKLNASANFSLQTDCEVLQLNKKGERIDSLTTST
GTLVADDYVVAAGNGSKHLLAGTGTHVPLCGLKGYSLTLPFPQEMGIAPQISVTDYGHKIVYARLGDRLRIAAMVDIGYD
GNELRPERINALKQIVANSFPQLQGINDAELWTGMRPSTPAGPPLLGRAKYQNLWMNLGQGSLGFTLAAGSAVVLGALLS
GEDPVISLDGLTWSQSA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=415, Percent_Identity=36.3855421686747, Blast_Score=265, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45514; Mature: 45514

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRIVVIGGGVIGLATAWVLVKQGHQVQLLERNSQAGVATSFANGGQLSYRYVAPLADK
CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCC
GVPMQGLKWMGKSSSPLNMRLRMSFSQWRWLLEFLLACNSRTNKLNGDHILRLSLLSRQV
CCCHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHH
MEEWLLEDNLDDFHWRRSGKLIIHRRPQDLAKAAKGINPQFQQALSREECVHLEPALKHI
HHHHHHHCCCCHHHEECCCCEEEEECCHHHHHHHCCCCHHHHHHHCHHHCEEHHHHHHHH
SHSLCGGIYSPGDETADCYKFCQALLAKLNASANFSLQTDCEVLQLNKKGERIDSLTTST
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCHHHHHCCCC
GTLVADDYVVAAGNGSKHLLAGTGTHVPLCGLKGYSLTLPFPQEMGIAPQISVTDYGHKI
CCEEECCEEEEECCCCCEEEEECCCCCEEECCCCCEEECCCHHHCCCCCEEEEECCCCEE
VYARLGDRLRIAAMVDIGYDGNELRPERINALKQIVANSFPQLQGINDAELWTGMRPSTP
EEEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
AGPPLLGRAKYQNLWMNLGQGSLGFTLAAGSAVVLGALLSGEDPVISLDGLTWSQSA
CCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKKRIVVIGGGVIGLATAWVLVKQGHQVQLLERNSQAGVATSFANGGQLSYRYVAPLADK
CCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCC
GVPMQGLKWMGKSSSPLNMRLRMSFSQWRWLLEFLLACNSRTNKLNGDHILRLSLLSRQV
CCCHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHH
MEEWLLEDNLDDFHWRRSGKLIIHRRPQDLAKAAKGINPQFQQALSREECVHLEPALKHI
HHHHHHHCCCCHHHEECCCCEEEEECCHHHHHHHCCCCHHHHHHHCHHHCEEHHHHHHHH
SHSLCGGIYSPGDETADCYKFCQALLAKLNASANFSLQTDCEVLQLNKKGERIDSLTTST
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCHHHHHCCCC
GTLVADDYVVAAGNGSKHLLAGTGTHVPLCGLKGYSLTLPFPQEMGIAPQISVTDYGHKI
CCEEECCEEEEECCCCCEEEEECCCCCEEECCCCCEEECCCHHHCCCCCEEEEECCCCEE
VYARLGDRLRIAAMVDIGYDGNELRPERINALKQIVANSFPQLQGINDAELWTGMRPSTP
EEEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
AGPPLLGRAKYQNLWMNLGQGSLGFTLAAGSAVVLGALLSGEDPVISLDGLTWSQSA
CCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]