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The map label for this gene is cbpA [H]

Identifier: 218548518

GI number: 218548518

Start: 1186675

End: 1187595

Strand: Reverse

Name: cbpA [H]

Synonym: EFER_1147

Alternate gene names: 218548518

Gene position: 1187595-1186675 (Counterclockwise)

Preceding gene: 218548519

Following gene: 218548517

Centisome position: 25.88

GC content: 50.81

Gene sequence:

>921_bases
ATGGAATTAAAGGATTATTACGCCATTATGGGCGTGAAACCGACGGACGATCTCAAGACAATCAAGACCGCCTATCGTCG
ACTGGCCCGTAAGTACCATCCCGATGTCAGCAAAGAGCCCGATGCCGAAGCCCGCTTCAAAGAAGTCGCTGAAGCCTGGG
AAGTATTGAGTGACGAGCAACGCCGTGCTGAGTACGACCAGATGTGGCAGCATCGCAACGATCCACAATTCAATCGTCAA
TTCCACCATGGTGATGGGCAAAGCTTTAATGCCGAAGATTTTGACGATATTTTCTCGTCGATCTTTGGTCAACATGCTCG
CCAGGCACGTCAACGTCCGGCTACGCGTGGCCATGATATCGAAATTGAAGTGCCCGTTTTCCTTGAAGAGACACTCAGCG
AACATAAACGGACTATCAGTTATAACCTGCCTGTCTACAACGCCTTTGGCATGGTCGAGCAGGAGATCCCAAAAACTCTC
AATGTGAAAATTCCGGCAGGCGTTGGCAACGGTCAACGTATTCGTCTGAAAGGCCAGGGCACTCCAGGTGAGAATGGCGG
ACCCAATGGTGATTTGTGGCTGATTATTCATATCGCTCCCCATCCCTTGTTTGATGTTGTAGGTCAGGATCTGGAGATCG
TCGTGCCTGTTGCGCCCTGGGAAGCCGCTTTAGGGGGCAAAGTTACGGTTCCAACATTGAAAGAGAGCATTCTGCTGACT
ATCCCGGCGGGTAGTCAGGCCGGACAACGTTTACGTGTGAAAGGCAAAGGTCTGGTGAGCAAAAAACATACCGGCGATCT
CTACGCCGTGCTGAAAATTGTGATGCCACCAAAACCAGATGAAAACGCTACTGCGCTGTGGCAACAACTGGCAGACGCCC
AGTCGTCATTTGATCCGCGTAAAGATTGGGGGAAAGCATAA

Upstream 100 bases:

>100_bases
TTTCACTGCCCTACGATTTTTTCTGATTTCCCCTACACTTAACACTGATACCTTGTCAGGGGTTTCCCTTTGTCTGTATT
GATTTACGCGAGATAATGCT

Downstream 100 bases:

>100_bases
TGGCTAATGTGACGGTGAGTTTTACGATTACTGAGTTTTGCCTGCATACCGGTGTTTCAGAAGATGATCTGTATGAGATC
GTCGGCTTAGGGGTGGTTGA

Product: curved DNA-binding protein CbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQ
FHHGDGQSFNAEDFDDIFSSIFGQHARQARQRPATRGHDIEIEVPVFLEETLSEHKRTISYNLPVYNAFGMVEQEIPKTL
NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLIIHIAPHPLFDVVGQDLEIVVPVAPWEAALGGKVTVPTLKESILLT
IPAGSQAGQRLRVKGKGLVSKKHTGDLYAVLKIVMPPKPDENATALWQQLADAQSSFDPRKDWGKA

Sequences:

>Translated_306_residues
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQ
FHHGDGQSFNAEDFDDIFSSIFGQHARQARQRPATRGHDIEIEVPVFLEETLSEHKRTISYNLPVYNAFGMVEQEIPKTL
NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLIIHIAPHPLFDVVGQDLEIVVPVAPWEAALGGKVTVPTLKESILLT
IPAGSQAGQRLRVKGKGLVSKKHTGDLYAVLKIVMPPKPDENATALWQQLADAQSSFDPRKDWGKA
>Mature_306_residues
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQ
FHHGDGQSFNAEDFDDIFSSIFGQHARQARQRPATRGHDIEIEVPVFLEETLSEHKRTISYNLPVYNAFGMVEQEIPKTL
NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLIIHIAPHPLFDVVGQDLEIVVPVAPWEAALGGKVTVPTLKESILLT
IPAGSQAGQRLRVKGKGLVSKKHTGDLYAVLKIVMPPKPDENATALWQQLADAQSSFDPRKDWGKA

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI5453690, Length=338, Percent_Identity=27.810650887574, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI6631085, Length=323, Percent_Identity=29.1021671826625, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI201862587, Length=330, Percent_Identity=26.6666666666667, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI7706495, Length=297, Percent_Identity=28.6195286195286, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI56549115, Length=330, Percent_Identity=26.6666666666667, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI201862518, Length=330, Percent_Identity=26.6666666666667, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI39204547, Length=301, Percent_Identity=26.9102990033223, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI9558755, Length=113, Percent_Identity=44.2477876106195, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI194328758, Length=254, Percent_Identity=30.3149606299213, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI194328760, Length=254, Percent_Identity=30.3149606299213, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI205360840, Length=107, Percent_Identity=39.2523364485981, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI205360838, Length=107, Percent_Identity=39.2523364485981, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI72534740, Length=103, Percent_Identity=36.8932038834951, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI194306642, Length=105, Percent_Identity=40, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI194306640, Length=105, Percent_Identity=40, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4504511, Length=135, Percent_Identity=34.0740740740741, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI56687498, Length=63, Percent_Identity=46.031746031746, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI17388799, Length=107, Percent_Identity=39.2523364485981, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4885495, Length=107, Percent_Identity=39.2523364485981, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787235, Length=306, Percent_Identity=96.078431372549, Blast_Score=615, Evalue=1e-177,
Organism=Escherichia coli, GI1786197, Length=355, Percent_Identity=34.3661971830986, Blast_Score=177, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17553096, Length=344, Percent_Identity=27.6162790697674, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17553098, Length=344, Percent_Identity=27.6162790697674, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17534355, Length=324, Percent_Identity=29.6296296296296, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI212645553, Length=298, Percent_Identity=28.1879194630872, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17507263, Length=62, Percent_Identity=50, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324265, Length=137, Percent_Identity=35.7664233576642, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320888, Length=100, Percent_Identity=42, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552813, Length=371, Percent_Identity=28.3018867924528, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI45549272, Length=371, Percent_Identity=28.3018867924528, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI45552811, Length=371, Percent_Identity=28.3018867924528, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI85726398, Length=338, Percent_Identity=29.585798816568, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24658562, Length=341, Percent_Identity=30.4985337243402, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24658555, Length=341, Percent_Identity=30.4985337243402, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI19920464, Length=336, Percent_Identity=28.2738095238095, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI18858081, Length=276, Percent_Identity=28.2608695652174, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24668492, Length=64, Percent_Identity=46.875, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24646562, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24646560, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24646558, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24646556, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21357547, Length=62, Percent_Identity=50, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 34390; Mature: 34390

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHH
RRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQARQRPATRGHDI
HHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
EIEVPVFLEETLSEHKRTISYNLPVYNAFGMVEQEIPKTLNVKIPAGVGNGQRIRLKGQG
EEEEHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECC
TPGENGGPNGDLWLIIHIAPHPLFDVVGQDLEIVVPVAPWEAALGGKVTVPTLKESILLT
CCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEEECCHHHHCCCEEECCCCCCEEEEE
IPAGSQAGQRLRVKGKGLVSKKHTGDLYAVLKIVMPPKPDENATALWQQLADAQSSFDPR
ECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
KDWGKA
HHCCCC
>Mature Secondary Structure
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHH
RRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQARQRPATRGHDI
HHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
EIEVPVFLEETLSEHKRTISYNLPVYNAFGMVEQEIPKTLNVKIPAGVGNGQRIRLKGQG
EEEEHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECC
TPGENGGPNGDLWLIIHIAPHPLFDVVGQDLEIVVPVAPWEAALGGKVTVPTLKESILLT
CCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEEECCHHHHCCCEEECCCCCCEEEEE
IPAGSQAGQRLRVKGKGLVSKKHTGDLYAVLKIVMPPKPDENATALWQQLADAQSSFDPR
ECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
KDWGKA
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA