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The map label for this gene is 218235568

Identifier: 218235568

GI number: 218235568

Start: 628821

End: 629837

Strand: Reverse

Name: 218235568

Synonym: BCB4264_A0643

Alternate gene names: NA

Gene position: 629837-628821 (Counterclockwise)

Preceding gene: 218234991

Following gene: 218235902

Centisome position: 11.62

GC content: 35.0

Gene sequence:

>1017_bases
ATGATGAAATCCGACACGAACAACAATACGCGAGCCAAAAAAGGACGCTCAAAGAAAAAACGCCTACTTTGGTTCCTTCT
TATTCCATTACTAATTGTAGCACTTGGAGCAGGAGGCTACTCCTTCCATATATACAGTAAAGCAAAGTCCGTCTTAAATA
ACGCTTATGCTGAACTAGGTCGAGGAGATAAGTCCAGTAAACGTGAAAAAGCAGTTAAACCTATGACCGACAATATTTCC
GTACTAATTATGGGTGTTGATGAAAGTGATATTAGGGAAAAAGGTTATGGAAAAGCAACTCGAACAGATGCGTTATTACT
TGCAACAATTAATAAAAACGATAAATCCGTTAAACTTGTAAGCATTCCACGTGACTCACGCGTCTACATTAAATCACGTG
ATAAATACGATAAAATCACACATGCGCACGTATTCGGTGGTGTAGACAGCACAATTGATACGGTAGAGAACTTTTTAGAT
GTTCCAGTTGATTATTATGTAAAATTCAATTTTAAATCCTTTATTAAAATTGTTGATTCTCTTGGTGGCATTACTGTGGA
CGTTCCAGTTGAATTCACAGAGCAAAATAGTAAAGATGAAGCAGATGCAATTCATCTAAAAAAAGGACGTCAACATTTAA
ATGGAGAAGAGGCACTGGCACTAGCTAGAACTCGTCATATCGATAGTGATTATATGCGTGGTCAACGTCAACAGCTTGTA
TTAGAGGCCATTGCTGAAAAGGCACTATCTCTTAATTCCATTAATAAAATCGGTGGCCTACTAGACGCTGTCGATAAAGA
TTTAAAAACCAATTTAACTTTTGATGATATGATGACAATTACAAAAAATTCAATGGATTCAAATTTAAAAATGGAAAAAA
TGCAAGTAGAGGGTACAGATAAATATATAGGTGGTATTTATTATTACGTTCCAAATGAAAAAAGCGTCGATACTATTTCA
ACTACCCTTCAAAAACATCTCGGTGTTACGAATAAAAATGAACATAAAAAATTATAA

Upstream 100 bases:

>100_bases
TTTATACATGTACAATCGCTTTTATTTAGCGTAAAATATTTTTTATGTGTTTGAATACACTTCTAAATGTATACACTTTG
ATAGTTTTAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TAAAAAGGCTGCTAGATCTTTCTAGACAGCCTTTTTATTATATTTTTCAACATATTTTTCATACACATTGTGACAAGAAG
TGACAATTATTACAGCGGTG

Product: transcription antiterminator, LytR family

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMKSDTNNNTRAKKGRSKKKRLLWFLLIPLLIVALGAGGYSFHIYSKAKSVLNNAYAELGRGDKSSKREKAVKPMTDNIS
VLIMGVDESDIREKGYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLD
VPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTITKNSMDSNLKMEKMQVEGTDKYIGGIYYYVPNEKSVDTIS
TTLQKHLGVTNKNEHKKL

Sequences:

>Translated_338_residues
MMKSDTNNNTRAKKGRSKKKRLLWFLLIPLLIVALGAGGYSFHIYSKAKSVLNNAYAELGRGDKSSKREKAVKPMTDNIS
VLIMGVDESDIREKGYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLD
VPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTITKNSMDSNLKMEKMQVEGTDKYIGGIYYYVPNEKSVDTIS
TTLQKHLGVTNKNEHKKL
>Mature_338_residues
MMKSDTNNNTRAKKGRSKKKRLLWFLLIPLLIVALGAGGYSFHIYSKAKSVLNNAYAELGRGDKSSKREKAVKPMTDNIS
VLIMGVDESDIREKGYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLD
VPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTITKNSMDSNLKMEKMQVEGTDKYIGGIYYYVPNEKSVDTIS
TTLQKHLGVTNKNEHKKL

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 37944; Mature: 37944

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSDTNNNTRAKKGRSKKKRLLWFLLIPLLIVALGAGGYSFHIYSKAKSVLNNAYAELG
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHC
RGDKSSKREKAVKPMTDNISVLIMGVDESDIREKGYGKATRTDALLLATINKNDKSVKLV
CCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEE
SIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDS
ECCCCCEEEEECCCCHHHHHHHHEECCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH
LGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHH
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTITKNSMDSNLKMEKMQVEGTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC
KYIGGIYYYVPNEKSVDTISTTLQKHLGVTNKNEHKKL
CEECEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MMKSDTNNNTRAKKGRSKKKRLLWFLLIPLLIVALGAGGYSFHIYSKAKSVLNNAYAELG
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHC
RGDKSSKREKAVKPMTDNISVLIMGVDESDIREKGYGKATRTDALLLATINKNDKSVKLV
CCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEE
SIPRDSRVYIKSRDKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDS
ECCCCCEEEEECCCCHHHHHHHHEECCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHH
LGGITVDVPVEFTEQNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLV
CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHHHH
LEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFDDMMTITKNSMDSNLKMEKMQVEGTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC
KYIGGIYYYVPNEKSVDTISTTLQKHLGVTNKNEHKKL
CEECEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]