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The map label for this gene is yoaR [H]

Identifier: 218235902

GI number: 218235902

Start: 627324

End: 628586

Strand: Reverse

Name: yoaR [H]

Synonym: BCB4264_A0642

Alternate gene names: 218235902

Gene position: 628586-627324 (Counterclockwise)

Preceding gene: 218235568

Following gene: 218236021

Centisome position: 11.6

GC content: 33.17

Gene sequence:

>1263_bases
ATGAAGCTAAGTAAAATACTGATTGGTTCTGCAATTGCTGGGGGCATATTACTTTGTGTAGGCGGTGTTGGGGGATATCA
ATATGTATCCAAATTAAATAATCAATTAGATACTACTGTATTACCAAATACTACATTTGAAGGTATTTCTCTCGACGGAA
AAAATAAGAAGGATATTCAAGCAATTATTAATCAAAAGGTAACCGAGTTAGATCAAAAATCCCTTACCTACATATTCCAA
AACGATAAACAAACTTACACATGGAAAGATTTAGGGATAAATTATAAAGAGAAAGATATTATTGACAAAATCTTCAAAGA
ACAAGAAGGAAACGTAATGAATCGTTATAAAATGCGTAAGCAAGCTGAAAACGGTGAATTAAAACGTGACTATAAATTAA
CACCACAATTAAATGCAACAGCTTATGAAACCTTTATAAAAGATAAATATAATGAAACATTAAAAAATCCTGTTAACGCA
GAATTAAGTATTGAAGGCTCAACAGTAAATATTAGTCAAAGCCAAAACGGAGAAAAAATTGATAAAGGGAAACTAAGCGG
TTTAACAAATGAAGCTATTACTACTGGTAAATCAGATGTTACATTACCAGTTACATTCATAAAACCAGAACGTTCTACAG
AAGACATACAGAAAATGGGTATTAAAGAAGTCATTGCTGAATATTCTACTCCAATGGCTGGCCGTAACGGAAATCAATCA
TTTAACGTAAATAAGTCAGCTAATACTTTAAGTGGGGTTATTGTCGCACCTGATGAAACATTTAGTTTTAACGGTCGCGT
TGGCGTAACTGATGCTGCACATGGTTATAAATCTGCAGCAGTATATTCACAAGGTAAAGTAATACAAAGTGCAGGCGGAG
GAGTTTGCCAAGTCAGTAGTACATTATACAGTGCAGCTTTAAGGGCAGATTTAGGCATTGTTTCTCGAAGCAATCATTCT
ATGCCAGTAAATTATTTACCACTTGGGCAAGATGCAGCAGTAGCAGATTATGGTCCAGATTTAAAATTTAAAAATAATAC
AGGCAATCATATTTATATTCAAGCATTTTCAAATGGAGGTAGTATTACTACACGCATTTTCGGTACAAATACTGGTAAAA
ATGTTGAAGTTTCTTCTCAAGTAATTAGTAGAACTAGTGATAAAATCACCGCGGTTACGTATAAAAAAGTAACACAAAAC
GGGGAAGTAATATCAAATGGACAAATTTCAAAAAGCGTATATAAAAGCGCTCCAAAAGAATAG

Upstream 100 bases:

>100_bases
AAAATAATAGTATACTAGTACGTACATAATGTTATTTTCATCATTTTTATACAAAAAATGTAATACATATATTTATACAT
AAATTTCTGGGGGGAAATAA

Downstream 100 bases:

>100_bases
ATAATACCAACCGAATAGCATAAAGAAAAAGGCGTGATTAAATCACGCCTTTTTCTTTTGCAGTAATAGTAAAAAAGTTT
CAAGATGGTCTTTCGTTTCT

Product: vancomycin B-type resistance protein VanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKLSKILIGSAIAGGILLCVGGVGGYQYVSKLNNQLDTTVLPNTTFEGISLDGKNKKDIQAIINQKVTELDQKSLTYIFQ
NDKQTYTWKDLGINYKEKDIIDKIFKEQEGNVMNRYKMRKQAENGELKRDYKLTPQLNATAYETFIKDKYNETLKNPVNA
ELSIEGSTVNISQSQNGEKIDKGKLSGLTNEAITTGKSDVTLPVTFIKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSSTLYSAALRADLGIVSRSNHS
MPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGGSITTRIFGTNTGKNVEVSSQVISRTSDKITAVTYKKVTQN
GEVISNGQISKSVYKSAPKE

Sequences:

>Translated_420_residues
MKLSKILIGSAIAGGILLCVGGVGGYQYVSKLNNQLDTTVLPNTTFEGISLDGKNKKDIQAIINQKVTELDQKSLTYIFQ
NDKQTYTWKDLGINYKEKDIIDKIFKEQEGNVMNRYKMRKQAENGELKRDYKLTPQLNATAYETFIKDKYNETLKNPVNA
ELSIEGSTVNISQSQNGEKIDKGKLSGLTNEAITTGKSDVTLPVTFIKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSSTLYSAALRADLGIVSRSNHS
MPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGGSITTRIFGTNTGKNVEVSSQVISRTSDKITAVTYKKVTQN
GEVISNGQISKSVYKSAPKE
>Mature_420_residues
MKLSKILIGSAIAGGILLCVGGVGGYQYVSKLNNQLDTTVLPNTTFEGISLDGKNKKDIQAIINQKVTELDQKSLTYIFQ
NDKQTYTWKDLGINYKEKDIIDKIFKEQEGNVMNRYKMRKQAENGELKRDYKLTPQLNATAYETFIKDKYNETLKNPVNA
ELSIEGSTVNISQSQNGEKIDKGKLSGLTNEAITTGKSDVTLPVTFIKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSSTLYSAALRADLGIVSRSNHS
MPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGGSITTRIFGTNTGKNVEVSSQVISRTSDKITAVTYKKVTQN
GEVISNGQISKSVYKSAPKE

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 45658; Mature: 45658

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKILIGSAIAGGILLCVGGVGGYQYVSKLNNQLDTTVLPNTTFEGISLDGKNKKDIQ
CCCHHEEHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCEEECCCCHHHHH
AIINQKVTELDQKSLTYIFQNDKQTYTWKDLGINYKEKDIIDKIFKEQEGNVMNRYKMRK
HHHHHHHHHHHHHHEEEEEECCCCEEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
QAENGELKRDYKLTPQLNATAYETFIKDKYNETLKNPVNAELSIEGSTVNISQSQNGEKI
HCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCC
DKGKLSGLTNEAITTGKSDVTLPVTFIKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
CCCHHCCCCCHHHCCCCCCEEEEEEEECCCCCHHHHHHHCHHHHHHHHCCCCCCCCCCCC
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSS
EECCCCCCCEEEEEECCCCCEECCCEECCCCCCCCCCHHEEECCCCEEECCCCCEEEEHH
TLYSAALRADLGIVSRSNHSMPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGG
HHHHHHHHHHHCEEECCCCCCCEEEEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCC
SITTRIFGTNTGKNVEVSSQVISRTSDKITAVTYKKVTQNGEVISNGQISKSVYKSAPKE
EEEEEEEECCCCCCEEHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MKLSKILIGSAIAGGILLCVGGVGGYQYVSKLNNQLDTTVLPNTTFEGISLDGKNKKDIQ
CCCHHEEHHHHHHCCEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCCEEECCCCHHHHH
AIINQKVTELDQKSLTYIFQNDKQTYTWKDLGINYKEKDIIDKIFKEQEGNVMNRYKMRK
HHHHHHHHHHHHHHEEEEEECCCCEEEEHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
QAENGELKRDYKLTPQLNATAYETFIKDKYNETLKNPVNAELSIEGSTVNISQSQNGEKI
HCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCC
DKGKLSGLTNEAITTGKSDVTLPVTFIKPERSTEDIQKMGIKEVIAEYSTPMAGRNGNQS
CCCHHCCCCCHHHCCCCCCEEEEEEEECCCCCHHHHHHHCHHHHHHHHCCCCCCCCCCCC
FNVNKSANTLSGVIVAPDETFSFNGRVGVTDAAHGYKSAAVYSQGKVIQSAGGGVCQVSS
EECCCCCCCEEEEEECCCCCEECCCEECCCCCCCCCCHHEEECCCCEEECCCCCEEEEHH
TLYSAALRADLGIVSRSNHSMPVNYLPLGQDAAVADYGPDLKFKNNTGNHIYIQAFSNGG
HHHHHHHHHHHCEEECCCCCCCEEEEECCCCCEECCCCCCCEEECCCCCEEEEEEECCCC
SITTRIFGTNTGKNVEVSSQVISRTSDKITAVTYKKVTQNGEVISNGQISKSVYKSAPKE
EEEEEEEECCCCCCEEHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]