| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ppc [H]
Identifier: 213690981
GI number: 213690981
Start: 66467
End: 69220
Strand: Reverse
Name: ppc [H]
Synonym: Blon_0059
Alternate gene names: 213690981
Gene position: 69220-66467 (Counterclockwise)
Preceding gene: 213690984
Following gene: 213690980
Centisome position: 2.44
GC content: 63.87
Gene sequence:
>2754_bases ATGGCAACACCTGAAGAACAGATCACTCCCGCTGACGCCGCCATCGTCACTACCGGGACCGGCCGAAAGGGCCCGGAGGA GCATGATCTTCCCGAAAGCCTGAAGTACGACATGGATCTGTGTCTTGAGATCCTGCGTAACGTACTGGGCGAATACAACC CCGAACTGCTGTCTACGTTCGACACCGTGCGTCATTACGCGGTGGAGGCCAGCGCCGAGCATTTCGCCGAGCTGAAGGAT CCGAACCCCGACCAGGATGGCCTGAAGGAGGCCGTGAACGTCATCGACAACATGACGTTGCACGACGCCCAGCTGCTGGC CCGCGCGTTCGCCACGTATTTCCATCTGGCAAACCTGTCCGAGGAGAACTACCGTGTTTCCGTGCTCCACGAGCGCGAGA ACAACGTGTCCGTTGACCAGGCGGTCGACCCGATCAACGAGCTCACCGTCGCCTACCACCAGCTCATCAATGAGACTGGC CCGGCCAAGGCCAAGGAACTGCTCAACCAGCTCGAATTCCACCCCGTCTTCACGGCGCACCCCACTGAGGCCCGTCGTAA GGCCGTGGAAGGCAAGATCCGCCGCGTTTCCGAATTGCTTGAGGAGTACAAGCGCCTCGGCGGCTCGGATAAGAAGGAAT GCCTGCGCCGTCTCTACAACGAGATCGACGCCCTGTTCCGCACCTCTCCGATCGCGCTGAAGAAGCCGACCCCGGTTGAG GAAGCGGACACGATTCTCGACATCTTCGACAACACGCTGTTCAACACCATCCCCAAGGTCTACCGTCGCTTCGACGACTG GGTCCTGGGCGATAAGGCCGGTCTCGTCGAGCCCGCTTGCCCCGCGTTCTTCCACCCGGGCAGCTGGATCGGCTCCGACC GCGACGGTAACCCGAACGTCACCGCCAAGGTGAGCCGCGCCGTGGCCCGCAAGTTCTCCGATCACGTGATCGCCGCCCTT GAGGAAGCCACCCGCACCGTGGGCCGCAACCTCACGATGGAAGCCGAGACCACGCCGCCAAGCGCCGAGCTCAAAAGCCT CTGGAGCCACCAGAAGGAAATGAGCGAGCGCCTGACCGACAAGGCCGCCCTGATCTCCACCAAGGAGATGCACCGCGCGG TCATGCTGGTGATGGCCGATCGTCTGCACTACACCATCGAGCGCGATGCCGACCTCATGTACCACTCCTGCGACGACTTC CTCGCCGACCTCAAGGTGGTCCAGCGTTCGCTGGCCGCCGCCGGTGCCAAGCGTTCCGCTTACGGCCCGCTGCAGGATCT GATCTGGCAGACCGAGACCTTCGGCTTCCACATGGTGGAGATGGAGTTCCGTCAGCACTCCGTGGTGCACGCCCGCGCCC TTGCGGATATCCGCGAGCACGGCCTGCACGGCGAGCGCGGCGAACTGCAGCCGATGACGCACGAGGTGCTCGACACCTTC CGCGCCCTCGGTGCCATCCAGAAGCGCAACGGCCTCAAGGCCGCCCGCCGCTACATCATCTCCTTCACCAAGAGCGCCCA GAACATCAAGGATGTCTACGAGCTCAACCGCTTGGCCTTCTCCCACCCGGAGGACGTGCCCACCATCGACGTGATCCCGC TGTTCGAGCAGCTTGAGGATCTGCAGAACTCGGTGGACGTGCTCGAGGAAATGATCAAGATCCCCGAGGTTCAGGCTCGT CTGAAGGCCACCGGCAACAAGCTCGAGGTCATGCTCGGCTACTCCGACTCCTCGAAGGACGCCGGCCCGACCTCCGCCAC GCTGGCCCTGCACTCCGCTCAGGAGCGCATCGCCAAATGGGCTGAGTCGCACGACATCGACCTGACCCTGTTCCATGGCC GCGGCGGTGCCGTCGGTCGTGGCGGCGGCCCCGCCAACCGCGCGGTGCTCGCCCAGCCGGTCGGTTCCGTCAAGTGCCGC TTCAAGCTCACCGAGCAGGGCGAGGTCATCTTCGCCCGTTACGGCAACCCGGTGCTGGCCATCCGCCACGTCGAGTCCGT GGCTGCGGCGACCTTGCTGCAGTCCGCGCCGAGCGTGGAGAAGCGCAACACCGAGATGACCGAGAGGTACGCCGACATGG CCGCTCAGCTCGACGAGGCCGCGCACAACCGTTTCCTCGACCTGTTGAACACCGATGGCTTCGCTCCGTGGTTCTCGATC GTTACGCCGCTGACCGAAATCGGCCTGCTGCCGATCGGCTCCCGCCCGGCCAAGCGTGGCCTCGGCGCCAAGTCGCTCGA CGACCTGCGTACGATTCCGTGGATCTTCTCCTGGGCCCAGGCCCGCATCAACCTGGCCGCTTGGTACGGTCTCGGCACCG CATGCGAGAAGTTCGGCGATCTGGAGACCATGCGTCAGGCTTACGAGGAATGGCCGCTGTTCTCCACGTTCATCGACAAC ATCGAGATGTCCATCGCCAAGACGGATGAGCGCATCGCCAGGATGTACCTTGCCCTCGGCGACCGCGAGGACCTCAATGA GAAGGTGCTCAACGAGATGGAGCTCACCCGCAAGTGGGTTCTGGCCATCGTGGGTGACAAGTGGCCGCTGCAGCACCGTC ACGTGCTCGGCCAGGCCATCCGCATCCGCTCCCCATACGTGGACGCGCTGTCCGTCACTCAGGTGCTGGCGCTCAAGTCG CTGCGCAAGAAGGTGGACAAGGAAGAGCTCTCGCAGAGCCAACAGGCCGGATTCATCTACCTCATCCTGTGCACCGTCTC CGGCGTCGCCGCGGGCCTGCAGAACACGGGCTGA
Upstream 100 bases:
>100_bases AATATGGGCTGTGGGCTCGCAACGACTGGCCTCAACAACTGCGGAGGAGCCGCAGACGACCGGTAGACCGAGCAACCTGT TATTCGGCAAAGGAGGCTAT
Downstream 100 bases:
>100_bases TTCCCGGCCGACCGATCGGGAAAAGCGAGCGGGGAGGTTCCGTGCCGATAAACGGCGCGGGCCTCCCCGCTCGCGTCATA CGGCCCTAGACTGGCCGGCG
Product: Phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 917; Mature: 916
Protein sequence:
>917_residues MATPEEQITPADAAIVTTGTGRKGPEEHDLPESLKYDMDLCLEILRNVLGEYNPELLSTFDTVRHYAVEASAEHFAELKD PNPDQDGLKEAVNVIDNMTLHDAQLLARAFATYFHLANLSEENYRVSVLHERENNVSVDQAVDPINELTVAYHQLINETG PAKAKELLNQLEFHPVFTAHPTEARRKAVEGKIRRVSELLEEYKRLGGSDKKECLRRLYNEIDALFRTSPIALKKPTPVE EADTILDIFDNTLFNTIPKVYRRFDDWVLGDKAGLVEPACPAFFHPGSWIGSDRDGNPNVTAKVSRAVARKFSDHVIAAL EEATRTVGRNLTMEAETTPPSAELKSLWSHQKEMSERLTDKAALISTKEMHRAVMLVMADRLHYTIERDADLMYHSCDDF LADLKVVQRSLAAAGAKRSAYGPLQDLIWQTETFGFHMVEMEFRQHSVVHARALADIREHGLHGERGELQPMTHEVLDTF RALGAIQKRNGLKAARRYIISFTKSAQNIKDVYELNRLAFSHPEDVPTIDVIPLFEQLEDLQNSVDVLEEMIKIPEVQAR LKATGNKLEVMLGYSDSSKDAGPTSATLALHSAQERIAKWAESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCR FKLTEQGEVIFARYGNPVLAIRHVESVAAATLLQSAPSVEKRNTEMTERYADMAAQLDEAAHNRFLDLLNTDGFAPWFSI VTPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEKFGDLETMRQAYEEWPLFSTFIDN IEMSIAKTDERIARMYLALGDREDLNEKVLNEMELTRKWVLAIVGDKWPLQHRHVLGQAIRIRSPYVDALSVTQVLALKS LRKKVDKEELSQSQQAGFIYLILCTVSGVAAGLQNTG
Sequences:
>Translated_917_residues MATPEEQITPADAAIVTTGTGRKGPEEHDLPESLKYDMDLCLEILRNVLGEYNPELLSTFDTVRHYAVEASAEHFAELKD PNPDQDGLKEAVNVIDNMTLHDAQLLARAFATYFHLANLSEENYRVSVLHERENNVSVDQAVDPINELTVAYHQLINETG PAKAKELLNQLEFHPVFTAHPTEARRKAVEGKIRRVSELLEEYKRLGGSDKKECLRRLYNEIDALFRTSPIALKKPTPVE EADTILDIFDNTLFNTIPKVYRRFDDWVLGDKAGLVEPACPAFFHPGSWIGSDRDGNPNVTAKVSRAVARKFSDHVIAAL EEATRTVGRNLTMEAETTPPSAELKSLWSHQKEMSERLTDKAALISTKEMHRAVMLVMADRLHYTIERDADLMYHSCDDF LADLKVVQRSLAAAGAKRSAYGPLQDLIWQTETFGFHMVEMEFRQHSVVHARALADIREHGLHGERGELQPMTHEVLDTF RALGAIQKRNGLKAARRYIISFTKSAQNIKDVYELNRLAFSHPEDVPTIDVIPLFEQLEDLQNSVDVLEEMIKIPEVQAR LKATGNKLEVMLGYSDSSKDAGPTSATLALHSAQERIAKWAESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCR FKLTEQGEVIFARYGNPVLAIRHVESVAAATLLQSAPSVEKRNTEMTERYADMAAQLDEAAHNRFLDLLNTDGFAPWFSI VTPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEKFGDLETMRQAYEEWPLFSTFIDN IEMSIAKTDERIARMYLALGDREDLNEKVLNEMELTRKWVLAIVGDKWPLQHRHVLGQAIRIRSPYVDALSVTQVLALKS LRKKVDKEELSQSQQAGFIYLILCTVSGVAAGLQNTG >Mature_916_residues ATPEEQITPADAAIVTTGTGRKGPEEHDLPESLKYDMDLCLEILRNVLGEYNPELLSTFDTVRHYAVEASAEHFAELKDP NPDQDGLKEAVNVIDNMTLHDAQLLARAFATYFHLANLSEENYRVSVLHERENNVSVDQAVDPINELTVAYHQLINETGP AKAKELLNQLEFHPVFTAHPTEARRKAVEGKIRRVSELLEEYKRLGGSDKKECLRRLYNEIDALFRTSPIALKKPTPVEE ADTILDIFDNTLFNTIPKVYRRFDDWVLGDKAGLVEPACPAFFHPGSWIGSDRDGNPNVTAKVSRAVARKFSDHVIAALE EATRTVGRNLTMEAETTPPSAELKSLWSHQKEMSERLTDKAALISTKEMHRAVMLVMADRLHYTIERDADLMYHSCDDFL ADLKVVQRSLAAAGAKRSAYGPLQDLIWQTETFGFHMVEMEFRQHSVVHARALADIREHGLHGERGELQPMTHEVLDTFR ALGAIQKRNGLKAARRYIISFTKSAQNIKDVYELNRLAFSHPEDVPTIDVIPLFEQLEDLQNSVDVLEEMIKIPEVQARL KATGNKLEVMLGYSDSSKDAGPTSATLALHSAQERIAKWAESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCRF KLTEQGEVIFARYGNPVLAIRHVESVAAATLLQSAPSVEKRNTEMTERYADMAAQLDEAAHNRFLDLLNTDGFAPWFSIV TPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEKFGDLETMRQAYEEWPLFSTFIDNI EMSIAKTDERIARMYLALGDREDLNEKVLNEMELTRKWVLAIVGDKWPLQHRHVLGQAIRIRSPYVDALSVTQVLALKSL RKKVDKEELSQSQQAGFIYLILCTVSGVAAGLQNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=930, Percent_Identity=29.6774193548387, Blast_Score=294, Evalue=1e-80,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 102623; Mature: 102492
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPEEQITPADAAIVTTGTGRKGPEEHDLPESLKYDMDLCLEILRNVLGEYNPELLSTF CCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DTVRHYAVEASAEHFAELKDPNPDQDGLKEAVNVIDNMTLHDAQLLARAFATYFHLANLS HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC EENYRVSVLHERENNVSVDQAVDPINELTVAYHQLINETGPAKAKELLNQLEFHPVFTAH CCCCEEEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECC PTEARRKAVEGKIRRVSELLEEYKRLGGSDKKECLRRLYNEIDALFRTSPIALKKPTPVE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EADTILDIFDNTLFNTIPKVYRRFDDWVLGDKAGLVEPACPAFFHPGSWIGSDRDGNPNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH TAKVSRAVARKFSDHVIAALEEATRTVGRNLTMEAETTPPSAELKSLWSHQKEMSERLTD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH KAALISTKEMHRAVMLVMADRLHYTIERDADLMYHSCDDFLADLKVVQRSLAAAGAKRSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YGPLQDLIWQTETFGFHMVEMEFRQHSVVHARALADIREHGLHGERGELQPMTHEVLDTF CCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RALGAIQKRNGLKAARRYIISFTKSAQNIKDVYELNRLAFSHPEDVPTIDVIPLFEQLED HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LQNSVDVLEEMIKIPEVQARLKATGNKLEVMLGYSDSSKDAGPTSATLALHSAQERIAKW HHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH AESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCRFKLTEQGEVIFARYGNPVLA HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEE IRHVESVAAATLLQSAPSVEKRNTEMTERYADMAAQLDEAAHNRFLDLLNTDGFAPWFSI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VTPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEKFGD HHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC LETMRQAYEEWPLFSTFIDNIEMSIAKTDERIARMYLALGDREDLNEKVLNEMELTRKWV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LAIVGDKWPLQHRHVLGQAIRIRSPYVDALSVTQVLALKSLRKKVDKEELSQSQQAGFIY HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEE LILCTVSGVAAGLQNTG EHHHHHHHHHHHHCCCC >Mature Secondary Structure ATPEEQITPADAAIVTTGTGRKGPEEHDLPESLKYDMDLCLEILRNVLGEYNPELLSTF CCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DTVRHYAVEASAEHFAELKDPNPDQDGLKEAVNVIDNMTLHDAQLLARAFATYFHLANLS HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC EENYRVSVLHERENNVSVDQAVDPINELTVAYHQLINETGPAKAKELLNQLEFHPVFTAH CCCCEEEEEEECCCCCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECC PTEARRKAVEGKIRRVSELLEEYKRLGGSDKKECLRRLYNEIDALFRTSPIALKKPTPVE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EADTILDIFDNTLFNTIPKVYRRFDDWVLGDKAGLVEPACPAFFHPGSWIGSDRDGNPNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH TAKVSRAVARKFSDHVIAALEEATRTVGRNLTMEAETTPPSAELKSLWSHQKEMSERLTD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH KAALISTKEMHRAVMLVMADRLHYTIERDADLMYHSCDDFLADLKVVQRSLAAAGAKRSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YGPLQDLIWQTETFGFHMVEMEFRQHSVVHARALADIREHGLHGERGELQPMTHEVLDTF CCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RALGAIQKRNGLKAARRYIISFTKSAQNIKDVYELNRLAFSHPEDVPTIDVIPLFEQLED HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LQNSVDVLEEMIKIPEVQARLKATGNKLEVMLGYSDSSKDAGPTSATLALHSAQERIAKW HHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH AESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCRFKLTEQGEVIFARYGNPVLA HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEE IRHVESVAAATLLQSAPSVEKRNTEMTERYADMAAQLDEAAHNRFLDLLNTDGFAPWFSI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VTPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEKFGD HHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC LETMRQAYEEWPLFSTFIDNIEMSIAKTDERIARMYLALGDREDLNEKVLNEMELTRKWV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LAIVGDKWPLQHRHVLGQAIRIRSPYVDALSVTQVLALKSLRKKVDKEELSQSQQAGFIY HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEE LILCTVSGVAAGLQNTG EHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA