Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
---|---|
Accession | NC_011593 |
Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213690984
Identifier: 213690984
GI number: 213690984
Start: 73590
End: 74585
Strand: Reverse
Name: 213690984
Synonym: Blon_0062
Alternate gene names: NA
Gene position: 74585-73590 (Counterclockwise)
Preceding gene: 213690986
Following gene: 213690981
Centisome position: 2.63
GC content: 51.51
Gene sequence:
>996_bases GTGATCATCATGGGTAGCTCAACGGCATTGACCGAGCTGACAATGCAGAAGTATCAACGAATGCAGACGTGCGCAGATGT TCAACGACGAAGCGCATGGCGCCCACCTTATGCCCTGACAACAGCGTTGGAGCTTTTGTCAATTGAAGTACCCCGCATAT CAAGCAAACACAGAGGCCTTGCAACTACAACCATTGTTGCGGTTCCACACGCCAATGACAAACGGCACATTGTGGGGGTC AAAGTGGTTGTATGGCCTTTCCCACTAGACACGGTCATAATCGAGGGACAATTCACATGCACTTCACCAGCTTGCACATG GGCCATGTTCTCCGCGTATCTCGAACTTGAAGAACTCATCGTTCTCGCTGATTCCATGATGCGACGAGATCGAAGGCTCT GCAGAACAACCATCGACGCCCTTTCTCTGTATCTCGATGAGGCCGAGGCCCAGGTGCGAGCCGACAAAGAGAATGGAGCC AATTCGTATTTGTTCCGCGGGTATAACAAATGCCGTCGCGCCCTACTTTTGGCGCGCGCGGGCACAGATTCCTCCATGGA AACACGAACTCGTTTGGCTCTCTTGAAATACGGTCTGGATTGCCCGCAGGTGAATTATCCAATATTCGTAGGAAACAACA CCAGACCCATATATCTCGATCTTGCATACCCTGAATTCAAGGTATGCATCGAATACGAAGGCTCTCATCATGCCGGGCAA TGGCTGAATGACGCGAGACGCCGCCAGATGATCGAAGACGCTGGCTGGAAGTACATTCAAGTCACCAAATTAGATATTGG CAACGAAGCGGGAGAAGAGGCCCTTGCCCGAAGAGTTGCCGAAAGGATACAGGAGGTTACGGGCAAAACGGTCCAGCTCA CGATGCGGCAAACCACCCAGCAAATTAGCGATGTCCGAAAGCTACGCCGTATTCCGCTGTACAAACGGCTGAAATTCGAG CCTCTGCTGCCAATTATTCCGACGACGCAGGAATAA
Upstream 100 bases:
>100_bases CCACCGACTTATCCACATTTATCCACCGAAAAATTGGGGCGGTAGACAAGGCCGGTAGCCGGACTCTACACTGCGAGGAC AAAGCGAACATCACGAAGGG
Downstream 100 bases:
>100_bases TAAGCCCGGTAGAGTCAGTCCGCACCGTCCGCACCGCGCTACGGTATTCAAAACCCATTTCAAGGGGCTGATTTGGCCTC CGCCGGAGGTCTACTTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIIMGSSTALTELTMQKYQRMQTCADVQRRSAWRPPYALTTALELLSIEVPRISSKHRGLATTTIVAVPHANDKRHIVGV KVVVWPFPLDTVIIEGQFTCTSPACTWAMFSAYLELEELIVLADSMMRRDRRLCRTTIDALSLYLDEAEAQVRADKENGA NSYLFRGYNKCRRALLLARAGTDSSMETRTRLALLKYGLDCPQVNYPIFVGNNTRPIYLDLAYPEFKVCIEYEGSHHAGQ WLNDARRRQMIEDAGWKYIQVTKLDIGNEAGEEALARRVAERIQEVTGKTVQLTMRQTTQQISDVRKLRRIPLYKRLKFE PLLPIIPTTQE
Sequences:
>Translated_331_residues MIIMGSSTALTELTMQKYQRMQTCADVQRRSAWRPPYALTTALELLSIEVPRISSKHRGLATTTIVAVPHANDKRHIVGV KVVVWPFPLDTVIIEGQFTCTSPACTWAMFSAYLELEELIVLADSMMRRDRRLCRTTIDALSLYLDEAEAQVRADKENGA NSYLFRGYNKCRRALLLARAGTDSSMETRTRLALLKYGLDCPQVNYPIFVGNNTRPIYLDLAYPEFKVCIEYEGSHHAGQ WLNDARRRQMIEDAGWKYIQVTKLDIGNEAGEEALARRVAERIQEVTGKTVQLTMRQTTQQISDVRKLRRIPLYKRLKFE PLLPIIPTTQE >Mature_331_residues MIIMGSSTALTELTMQKYQRMQTCADVQRRSAWRPPYALTTALELLSIEVPRISSKHRGLATTTIVAVPHANDKRHIVGV KVVVWPFPLDTVIIEGQFTCTSPACTWAMFSAYLELEELIVLADSMMRRDRRLCRTTIDALSLYLDEAEAQVRADKENGA NSYLFRGYNKCRRALLLARAGTDSSMETRTRLALLKYGLDCPQVNYPIFVGNNTRPIYLDLAYPEFKVCIEYEGSHHAGQ WLNDARRRQMIEDAGWKYIQVTKLDIGNEAGEEALARRVAERIQEVTGKTVQLTMRQTTQQISDVRKLRRIPLYKRLKFE PLLPIIPTTQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37830; Mature: 37830
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIMGSSTALTELTMQKYQRMQTCADVQRRSAWRPPYALTTALELLSIEVPRISSKHRGL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC ATTTIVAVPHANDKRHIVGVKVVVWPFPLDTVIIEGQFTCTSPACTWAMFSAYLELEELI EEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHH VLADSMMRRDRRLCRTTIDALSLYLDEAEAQVRADKENGANSYLFRGYNKCRRALLLARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC GTDSSMETRTRLALLKYGLDCPQVNYPIFVGNNTRPIYLDLAYPEFKVCIEYEGSHHAGQ CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCHHH WLNDARRRQMIEDAGWKYIQVTKLDIGNEAGEEALARRVAERIQEVTGKTVQLTMRQTTQ HHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH QISDVRKLRRIPLYKRLKFEPLLPIIPTTQE HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIIMGSSTALTELTMQKYQRMQTCADVQRRSAWRPPYALTTALELLSIEVPRISSKHRGL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC ATTTIVAVPHANDKRHIVGVKVVVWPFPLDTVIIEGQFTCTSPACTWAMFSAYLELEELI EEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHH VLADSMMRRDRRLCRTTIDALSLYLDEAEAQVRADKENGANSYLFRGYNKCRRALLLARA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC GTDSSMETRTRLALLKYGLDCPQVNYPIFVGNNTRPIYLDLAYPEFKVCIEYEGSHHAGQ CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCHHH WLNDARRRQMIEDAGWKYIQVTKLDIGNEAGEEALARRVAERIQEVTGKTVQLTMRQTTQ HHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHH QISDVRKLRRIPLYKRLKFEPLLPIIPTTQE HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA