Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213690980
Identifier: 213690980
GI number: 213690980
Start: 65675
End: 66313
Strand: Reverse
Name: 213690980
Synonym: Blon_0058
Alternate gene names: NA
Gene position: 66313-65675 (Counterclockwise)
Preceding gene: 213690981
Following gene: 213690972
Centisome position: 2.34
GC content: 50.23
Gene sequence:
>639_bases ATGATTGGAGGGGACATGGACAAGCCAGCGGACGGGCGCGGGAACACCGGGTCCACGGACGGCATCAGGACGGGGGGCGA CGCCGGGAACGAACGCCACGCTTGCAAAGCGAATCCGGCTACAACCGATGGCATTGGGAAGAAACACGGCACAGAAGATA TGTCAGAAAGTTTTTCCGGCAAGAAATATGCTTTGGCACCGAAAGCAGCAGCTACCAAATTCCTTAAGGCGAGTAGATGC TATGTGGTTTTGGGCAAGGCCAGACGTGTGCTATGGTGGCTGGGATTACTGCTGCTTTCACCAGCACTTATTTTGTGGGC GGAATGGGGCACCAATGGCGATGATGATACTATAATCTGCAGAGTTCTAACGTTCTCTTCCTCTTCGTGCATGAATTTAA CTACGGCAACTGAGTATGTACGTAGACTTACCTTAGTATTGATTATGGGGGTAGTCTGCTGGATTGCGGCGCTTGTCATC TTTGGCGTGCGTTCATATATGCGATCTGTATATCCGGAACTTCGTGATCATTCCCCTTCCGCCTCGCATGTCCTTGTGGG AATCATATCGTTTCTCGTGCTGGTTATGGTCTTTCCTGTTTTTGTGATAACGCTACTTTCCGCTCTAATGACTCTATGA
Upstream 100 bases:
>100_bases GGCGCGGGCCTCCCCGCTCGCGTCATACGGCCCTAGACTGGCCGGCGACGGCGCACGCCGGGCGGGCGCGCAGAGAACGG ACGCGCGGAACGGGCCCCGG
Downstream 100 bases:
>100_bases CGTTTTACCAGAGGCGCATTGCGTGGAATGGCTGAATCATTCCACGCAATGCGATCACAATCATGATTGATTAACGGTTC GATTTTCAAGAGATTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MIGGDMDKPADGRGNTGSTDGIRTGGDAGNERHACKANPATTDGIGKKHGTEDMSESFSGKKYALAPKAAATKFLKASRC YVVLGKARRVLWWLGLLLLSPALILWAEWGTNGDDDTIICRVLTFSSSSCMNLTTATEYVRRLTLVLIMGVVCWIAALVI FGVRSYMRSVYPELRDHSPSASHVLVGIISFLVLVMVFPVFVITLLSALMTL
Sequences:
>Translated_212_residues MIGGDMDKPADGRGNTGSTDGIRTGGDAGNERHACKANPATTDGIGKKHGTEDMSESFSGKKYALAPKAAATKFLKASRC YVVLGKARRVLWWLGLLLLSPALILWAEWGTNGDDDTIICRVLTFSSSSCMNLTTATEYVRRLTLVLIMGVVCWIAALVI FGVRSYMRSVYPELRDHSPSASHVLVGIISFLVLVMVFPVFVITLLSALMTL >Mature_212_residues MIGGDMDKPADGRGNTGSTDGIRTGGDAGNERHACKANPATTDGIGKKHGTEDMSESFSGKKYALAPKAAATKFLKASRC YVVLGKARRVLWWLGLLLLSPALILWAEWGTNGDDDTIICRVLTFSSSSCMNLTTATEYVRRLTLVLIMGVVCWIAALVI FGVRSYMRSVYPELRDHSPSASHVLVGIISFLVLVMVFPVFVITLLSALMTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22917; Mature: 22917
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGDMDKPADGRGNTGSTDGIRTGGDAGNERHACKANPATTDGIGKKHGTEDMSESFSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC KKYALAPKAAATKFLKASRCYVVLGKARRVLWWLGLLLLSPALILWAEWGTNGDDDTIIC CEEEECCHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RVLTFSSSSCMNLTTATEYVRRLTLVLIMGVVCWIAALVIFGVRSYMRSVYPELRDHSPS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASHVLVGIISFLVLVMVFPVFVITLLSALMTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGGDMDKPADGRGNTGSTDGIRTGGDAGNERHACKANPATTDGIGKKHGTEDMSESFSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC KKYALAPKAAATKFLKASRCYVVLGKARRVLWWLGLLLLSPALILWAEWGTNGDDDTIIC CEEEECCHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RVLTFSSSSCMNLTTATEYVRRLTLVLIMGVVCWIAALVIFGVRSYMRSVYPELRDHSPS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASHVLVGIISFLVLVMVFPVFVITLLSALMTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA