Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
---|---|
Accession | NC_011353 |
Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209397110
Identifier: 209397110
GI number: 209397110
Start: 3666247
End: 3666414
Strand: Reverse
Name: 209397110
Synonym: ECH74115_3964
Alternate gene names: NA
Gene position: 3666414-3666247 (Counterclockwise)
Preceding gene: 209396524
Following gene: 209397141
Centisome position: 65.8
GC content: 35.71
Gene sequence:
>168_bases TTGTCATCACATGTCATCGTCACTAGTGTCGATGACATCTTTTTTCCTGCATTACAGAAATTAATTTCCTTAAATAACAG CAAATTAAAAACTGGCATGATTTGTGAATGTATCGGCGCATTAACTGTCATTGCTGGAGAATTTGATGAACCGTTTCATC ATTGCTGA
Upstream 100 bases:
>100_bases GCTGATTTTTATGCTCGATGGCGGGGATTTCTCACCGCCGAAAACCTTCAGCGGAAAACTGATCCGCCGCGACTCACTCA TTGCTCTTTCGCGATAAACA
Downstream 100 bases:
>100_bases CGCGAGTAAATGTATTGGTTGCCGTACCTGTGAAGTGGCGTGCGTGGTTTCTCATCAGGAAAATCAGGACTGTGCATCGC TGACCCCGGAAACATTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MSSHVIVTSVDDIFFPALQKLISLNNSKLKTGMICECIGALTVIAGEFDEPFHHC
Sequences:
>Translated_55_residues MSSHVIVTSVDDIFFPALQKLISLNNSKLKTGMICECIGALTVIAGEFDEPFHHC >Mature_54_residues SSHVIVTSVDDIFFPALQKLISLNNSKLKTGMICECIGALTVIAGEFDEPFHHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6022; Mature: 5891
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHVIVTSVDDIFFPALQKLISLNNSKLKTGMICECIGALTVIAGEFDEPFHHC CCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SSHVIVTSVDDIFFPALQKLISLNNSKLKTGMICECIGALTVIAGEFDEPFHHC CCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA