Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is surE [H]
Identifier: 209695927
GI number: 209695927
Start: 2688822
End: 2689586
Strand: Reverse
Name: surE [H]
Synonym: VSAL_I2509
Alternate gene names: 209695927
Gene position: 2689586-2688822 (Counterclockwise)
Preceding gene: 209695928
Following gene: 209695926
Centisome position: 80.89
GC content: 40.52
Gene sequence:
>765_bases GTGAAGAAATTGCATATATTGCTAAGTAATGATGATGGGGTATTTGCTGAAGGGATGAATACTCTTGCTTTAGCTCTTAT TGATATCGCAGATATTACTATTGTTGCTCCTGATCGTAATCGTTCAGGCGCGTCAAATTCCCTTACTCTAGAATCGCCAC TTCGTGTCCGCCAAATTGCGGAGCATATTCACTCAGTACAAGGAACCCCAACCGATTGTGTTCATTTTGCATTGAATGAG TTAATGAAAGATAACTTACCTGATTTAGTCATTACAGGGATAAACCATGGTGCTAATTTAGGGGATGATACGCTGTATTC TGGTACCGTTGCAGCGGCAACAGAAGGGCATTTTTTAGGTTTGCCAGCCATAGCAATGTCATTGGTCGGAAAAACACATT TTGATACGGCAGCTCAGGTTGCGGTTGAATTAGTTAAGAATCATTTAGTAAAACCATTAACAACCAAAAGAGTATTGAAT GTTAACGTTCCGGACTGTGAATATTCACAATTATCAGATTGGAAAGTGACTCGTTTAGGTGCAAGGCATCATTCTGAAAG CATGATAAAGGCAAAGGATCCTAGAGGAGAAACCATTTATTGGTTAGGTCCTCCAGGGAAAAAGCAAGACGCTGGAGAGG GCACGGATTTCTATGCCATTGCCAATAACTGTGTGTCTATTACCCCTTTACAAGTCGATTTAACAGCACATGATTCATTA ACAATGATGAAAGAGTGGCTATCATTGCCGGAGAGCACTCATTAA
Upstream 100 bases:
>100_bases GGGCAGTTTTGCTACGGTTATCGTTCGTGAATTGTTACAAGAAATTGAAGTTGAACGTACATACGATTAGAACGACTTAA GAAATGAAGTGGAGAACTGA
Downstream 100 bases:
>100_bases TGATGCATTCTCGCTCTGAGTTACTTGATCAATTCTTACGTCAGCAAGGTATCCTCAATGAGGATATTCTTTTGGCTATC CGACAATTGCCACGTGAGCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKKLHILLSNDDGVFAEGMNTLALALIDIADITIVAPDRNRSGASNSLTLESPLRVRQIAEHIHSVQGTPTDCVHFALNE LMKDNLPDLVITGINHGANLGDDTLYSGTVAAATEGHFLGLPAIAMSLVGKTHFDTAAQVAVELVKNHLVKPLTTKRVLN VNVPDCEYSQLSDWKVTRLGARHHSESMIKAKDPRGETIYWLGPPGKKQDAGEGTDFYAIANNCVSITPLQVDLTAHDSL TMMKEWLSLPESTH
Sequences:
>Translated_254_residues MKKLHILLSNDDGVFAEGMNTLALALIDIADITIVAPDRNRSGASNSLTLESPLRVRQIAEHIHSVQGTPTDCVHFALNE LMKDNLPDLVITGINHGANLGDDTLYSGTVAAATEGHFLGLPAIAMSLVGKTHFDTAAQVAVELVKNHLVKPLTTKRVLN VNVPDCEYSQLSDWKVTRLGARHHSESMIKAKDPRGETIYWLGPPGKKQDAGEGTDFYAIANNCVSITPLQVDLTAHDSL TMMKEWLSLPESTH >Mature_254_residues MKKLHILLSNDDGVFAEGMNTLALALIDIADITIVAPDRNRSGASNSLTLESPLRVRQIAEHIHSVQGTPTDCVHFALNE LMKDNLPDLVITGINHGANLGDDTLYSGTVAAATEGHFLGLPAIAMSLVGKTHFDTAAQVAVELVKNHLVKPLTTKRVLN VNVPDCEYSQLSDWKVTRLGARHHSESMIKAKDPRGETIYWLGPPGKKQDAGEGTDFYAIANNCVSITPLQVDLTAHDSL TMMKEWLSLPESTH
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=246, Percent_Identity=56.0975609756098, Blast_Score=275, Evalue=3e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27577; Mature: 27577
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLHILLSNDDGVFAEGMNTLALALIDIADITIVAPDRNRSGASNSLTLESPLRVRQIA CCEEEEEEECCCCCCHHCHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEECCCHHHHHHH EHIHSVQGTPTDCVHFALNELMKDNLPDLVITGINHGANLGDDTLYSGTVAAATEGHFLG HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECCEEEEECCCCEEC LPAIAMSLVGKTHFDTAAQVAVELVKNHLVKPLTTKRVLNVNVPDCEYSQLSDWKVTRLG HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEHHC ARHHSESMIKAKDPRGETIYWLGPPGKKQDAGEGTDFYAIANNCVSITPLQVDLTAHDSL CHHCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCHH TMMKEWLSLPESTH HHHHHHHCCCCCCC >Mature Secondary Structure MKKLHILLSNDDGVFAEGMNTLALALIDIADITIVAPDRNRSGASNSLTLESPLRVRQIA CCEEEEEEECCCCCCHHCHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEECCCHHHHHHH EHIHSVQGTPTDCVHFALNELMKDNLPDLVITGINHGANLGDDTLYSGTVAAATEGHFLG HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEECCEEEEECCCCEEC LPAIAMSLVGKTHFDTAAQVAVELVKNHLVKPLTTKRVLNVNVPDCEYSQLSDWKVTRLG HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEHHC ARHHSESMIKAKDPRGETIYWLGPPGKKQDAGEGTDFYAIANNCVSITPLQVDLTAHDSL CHHCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEECCCHH TMMKEWLSLPESTH HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA