The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695901

Identifier: 209695901

GI number: 209695901

Start: 2655827

End: 2656576

Strand: Reverse

Name: 209695901

Synonym: VSAL_I2481

Alternate gene names: NA

Gene position: 2656576-2655827 (Counterclockwise)

Preceding gene: 209695902

Following gene: 209695898

Centisome position: 79.89

GC content: 34.4

Gene sequence:

>750_bases
ATGCGTACTTTATATCAACATGCCGACTACTCAGTAGCTCTTCAAAACTTTAATAGCAGTAGTCCAAAGAAATGGTCTAA
GTTCCAAGGAGTTCACCTTGCGGTTACTAATCATAGGTGTCCAATTTGTGAATGTACTTTAAAAAATGGGCAACTGTTAA
TGAGAGCTAGTAGTAAGCCTGGTAAGCCTCCTGTCCAAGTTAAAGCTACTGTTGATCATTATCGACCGCAAAAGTATTAT
CCTTTTCTAGAGTTTGAGGATAAAAATTATATTTTAATGTGCTCTGAATGTAATAATATTTATAAAGGCTCGGAATTCCC
AATATTTGGCGTTCAGGTAACGAGAGCAACCAGTGTTGCAGGATTAGCAACAGAACAACCACTTATAGCTAATCCTGTTA
GTGATAATATATTCGATTTATTTAAAGTCGTTGCTAGGCGTTTAACAAATGGGCGAAAGGTTCTAGAGTTAACGCCTAAA
CATACATCTGGTTATCTGCATGAGAAAGCTTTAGCCACAATTAAACTATTCGGTATAGGGGAGTGTGAAGTTAATGCACA
TTCTAATGTTAATATTAAAGCATTGAGAGTTAATCTACTTCGCAGCCATTTTTCAATGTTTGAAGATTTCATTAATGCTT
ATGAAAATAAAGATGTACCTAAAATGCGAAGTGAAATCACGAGAAAAAAATTAGATTCATACGGTTTCTTGAAAATTATA
CTTGCTAATAATGTAACAAACCTAACTTAA

Upstream 100 bases:

>100_bases
AAAAATAACAAGCACATCAGTTATGAACAATATGAAGCTTCTTCAGAGCAGGATATGGCAGACTTCTTAAGTGAGTTTGG
AGGCTCATTCAATGATTGAT

Downstream 100 bases:

>100_bases
GAAATGATTAAATATCGTACTCTAATCTATTGTCGCGGGGAGTTGTTGTGAGATGATAACTAAAATAACTGAGCTGAAGT
TCCTTTTTATCGTTTAGGGT

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRTLYQHADYSVALQNFNSSSPKKWSKFQGVHLAVTNHRCPICECTLKNGQLLMRASSKPGKPPVQVKATVDHYRPQKYY
PFLEFEDKNYILMCSECNNIYKGSEFPIFGVQVTRATSVAGLATEQPLIANPVSDNIFDLFKVVARRLTNGRKVLELTPK
HTSGYLHEKALATIKLFGIGECEVNAHSNVNIKALRVNLLRSHFSMFEDFINAYENKDVPKMRSEITRKKLDSYGFLKII
LANNVTNLT

Sequences:

>Translated_249_residues
MRTLYQHADYSVALQNFNSSSPKKWSKFQGVHLAVTNHRCPICECTLKNGQLLMRASSKPGKPPVQVKATVDHYRPQKYY
PFLEFEDKNYILMCSECNNIYKGSEFPIFGVQVTRATSVAGLATEQPLIANPVSDNIFDLFKVVARRLTNGRKVLELTPK
HTSGYLHEKALATIKLFGIGECEVNAHSNVNIKALRVNLLRSHFSMFEDFINAYENKDVPKMRSEITRKKLDSYGFLKII
LANNVTNLT
>Mature_249_residues
MRTLYQHADYSVALQNFNSSSPKKWSKFQGVHLAVTNHRCPICECTLKNGQLLMRASSKPGKPPVQVKATVDHYRPQKYY
PFLEFEDKNYILMCSECNNIYKGSEFPIFGVQVTRATSVAGLATEQPLIANPVSDNIFDLFKVVARRLTNGRKVLELTPK
HTSGYLHEKALATIKLFGIGECEVNAHSNVNIKALRVNLLRSHFSMFEDFINAYENKDVPKMRSEITRKKLDSYGFLKII
LANNVTNLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28277; Mature: 28277

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLYQHADYSVALQNFNSSSPKKWSKFQGVHLAVTNHRCPICECTLKNGQLLMRASSKP
CCCCHHCCCEEEEEECCCCCCCCCHHHHCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
GKPPVQVKATVDHYRPQKYYPFLEFEDKNYILMCSECNNIYKGSEFPIFGVQVTRATSVA
CCCCEEEEEEHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCC
GLATEQPLIANPVSDNIFDLFKVVARRLTNGRKVLELTPKHTSGYLHEKALATIKLFGIG
CCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHEEEEEEEECC
ECEVNAHSNVNIKALRVNLLRSHFSMFEDFINAYENKDVPKMRSEITRKKLDSYGFLKII
EEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE
LANNVTNLT
EECCCCCCC
>Mature Secondary Structure
MRTLYQHADYSVALQNFNSSSPKKWSKFQGVHLAVTNHRCPICECTLKNGQLLMRASSKP
CCCCHHCCCEEEEEECCCCCCCCCHHHHCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
GKPPVQVKATVDHYRPQKYYPFLEFEDKNYILMCSECNNIYKGSEFPIFGVQVTRATSVA
CCCCEEEEEEHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCC
GLATEQPLIANPVSDNIFDLFKVVARRLTNGRKVLELTPKHTSGYLHEKALATIKLFGIG
CCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHEEEEEEEECC
ECEVNAHSNVNIKALRVNLLRSHFSMFEDFINAYENKDVPKMRSEITRKKLDSYGFLKII
EEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE
LANNVTNLT
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA