| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ubiG [H]
Identifier: 209695247
GI number: 209695247
Start: 1882401
End: 1883126
Strand: Direct
Name: ubiG [H]
Synonym: VSAL_I1768
Alternate gene names: 209695247
Gene position: 1882401-1883126 (Clockwise)
Preceding gene: 209695245
Following gene: 209695248
Centisome position: 56.61
GC content: 39.94
Gene sequence:
>726_bases ATGAAAAAGGAATTAAGAACTATGACTCAGCAGTTAAATGTCGATCCAGCAGAAATCAAAAAATTTGAAGATATGGCCTC TCGTTGGTGGGATTTTGAAGGTGAATTTAAACCTCTACATCAAATCAATCCATTACGCCTTAATTATGTATTGACCAACG CCAATGGTCTATTTGGTAAAAAAGTATTAGATGTTGGTTGTGGCGGCGGTATTTTAGCTGAGAGCATGGCAAAACAAGGT GCAGACGTTATTGGGTTAGACATGGGGAAAGAGCCTCTAACCGTCGCTCGTCTTCATGCATTAGAAACGGGCACTATATT AGAATATATCCAATCTACTGCAGAGCAGCACGCAGAAGAATACCCTGAAACATACGATGTAATAACCTGTATGGAAATGC TAGAGCATGTGCCAGACCCTTTGTCTGTGATTCGTGCTTGCGCTAAAATGATAAAACCAGGTGGGCATGTATTTTTCTCC ACCTTAAACCGCAATATCAAATCCTATCTGTTTGCCATTGTTGGCGCAGAACACGTTCTTAAATTGGTCCCAAAAGGCAC TCATGATCACGATAAGTTCATCCGTCCTTCTGAATTATTAAAAATGCTCGATCAAACAGCATTACAAGAGCGTGGGATCA CTGGTCTTCATTACAATCCATTAACAGACGCTTATTCATTAGGCACAAATGTTGATGTTAATTACATCGTTCATACAACG CTGTAA
Upstream 100 bases:
>100_bases CAATTCATCATATTCTTGAAAAGCCTCATAAAAACCGGTGAAAAAATCGCCATTTTAAAGTCTCTCTTTCTGCTTTTTTT CTGTATATAATAAGGAGAAG
Downstream 100 bases:
>100_bases AATTCAGGCTCTTTATTTATTCTTAATGTAAATAAAGAGCTTTTTCTTTCTACGTCCCTCCTATCATTTTATCTCTTGCT CTTTTTCTCACGACATCACA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKKELRTMTQQLNVDPAEIKKFEDMASRWWDFEGEFKPLHQINPLRLNYVLTNANGLFGKKVLDVGCGGGILAESMAKQG ADVIGLDMGKEPLTVARLHALETGTILEYIQSTAEQHAEEYPETYDVITCMEMLEHVPDPLSVIRACAKMIKPGGHVFFS TLNRNIKSYLFAIVGAEHVLKLVPKGTHDHDKFIRPSELLKMLDQTALQERGITGLHYNPLTDAYSLGTNVDVNYIVHTT L
Sequences:
>Translated_241_residues MKKELRTMTQQLNVDPAEIKKFEDMASRWWDFEGEFKPLHQINPLRLNYVLTNANGLFGKKVLDVGCGGGILAESMAKQG ADVIGLDMGKEPLTVARLHALETGTILEYIQSTAEQHAEEYPETYDVITCMEMLEHVPDPLSVIRACAKMIKPGGHVFFS TLNRNIKSYLFAIVGAEHVLKLVPKGTHDHDKFIRPSELLKMLDQTALQERGITGLHYNPLTDAYSLGTNVDVNYIVHTT L >Mature_241_residues MKKELRTMTQQLNVDPAEIKKFEDMASRWWDFEGEFKPLHQINPLRLNYVLTNANGLFGKKVLDVGCGGGILAESMAKQG ADVIGLDMGKEPLTVARLHALETGTILEYIQSTAEQHAEEYPETYDVITCMEMLEHVPDPLSVIRACAKMIKPGGHVFFS TLNRNIKSYLFAIVGAEHVLKLVPKGTHDHDKFIRPSELLKMLDQTALQERGITGLHYNPLTDAYSLGTNVDVNYIVHTT L
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=243, Percent_Identity=35.3909465020576, Blast_Score=175, Evalue=4e-44, Organism=Escherichia coli, GI1788564, Length=227, Percent_Identity=69.6035242290749, Blast_Score=347, Evalue=4e-97, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=32.0512820512821, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324476, Length=246, Percent_Identity=32.1138211382114, Blast_Score=125, Evalue=9e-30, Organism=Drosophila melanogaster, GI281365311, Length=236, Percent_Identity=33.0508474576271, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24585589, Length=228, Percent_Identity=33.3333333333333, Blast_Score=148, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 27009; Mature: 27009
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKELRTMTQQLNVDPAEIKKFEDMASRWWDFEGEFKPLHQINPLRLNYVLTNANGLFGK CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEEECCCCCHHH KVLDVGCGGGILAESMAKQGADVIGLDMGKEPLTVARLHALETGTILEYIQSTAEQHAEE HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPETYDVITCMEMLEHVPDPLSVIRACAKMIKPGGHVFFSTLNRNIKSYLFAIVGAEHVL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KLVPKGTHDHDKFIRPSELLKMLDQTALQERGITGLHYNPLTDAYSLGTNVDVNYIVHTT HHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEEEEC L C >Mature Secondary Structure MKKELRTMTQQLNVDPAEIKKFEDMASRWWDFEGEFKPLHQINPLRLNYVLTNANGLFGK CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEEECCCCCHHH KVLDVGCGGGILAESMAKQGADVIGLDMGKEPLTVARLHALETGTILEYIQSTAEQHAEE HHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPETYDVITCMEMLEHVPDPLSVIRACAKMIKPGGHVFFSTLNRNIKSYLFAIVGAEHVL CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KLVPKGTHDHDKFIRPSELLKMLDQTALQERGITGLHYNPLTDAYSLGTNVDVNYIVHTT HHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEEEEC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA